Sesamum indicum (sesame): 105163500
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Entry
105163500 CDS
T04135
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105163500
Enzymes [BR:
sind01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105163500
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
105163500
NCBI-ProteinID:
XP_011080166
UniProt:
A0A6I9TC84
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Position
LG6:complement(3026044..3030473)
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AA seq
405 aa
AA seq
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MKSLRNSTMPDRSQDIKFKHEHAVDDPEAVAAMVDMTIRNSTERRKLGFLSCGTGNPIDD
CWRCDRNWIRHRRRLADCAIGFGRNAVGGRDGRYYVVTDPSDDDPVNPRPGTLRHAVIQD
RPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIANGACLTIQFVTNIIIHGLHIHDC
KPTGNAMVRSSPSHYGWRTRADGDGISIFGSSHIWIDHNSLSSCSDGLIDAIMGSTAITI
SNNYFSHHNEVMLLGHSDSYSRDKVMQVTVAYNHFGEGLTQRMPRCRHGYFHVVNNDYTS
WGMYAIGGSANPTINSQGNRFLAPNNPFAKEITKRIVNADDHRWKGWNWRSEGDLLLNGA
YFTPSGRGAAANYARASSLAAKSSSLVATLTAEAGVLHCRKGVQC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcttgagaaactcaacaatgccggataggtctcaagatattaagtttaagcac
gaacatgctgtagatgatccggaagctgtcgctgccatggttgatatgaccatccggaac
agcacggagagaaggaagctgggattcttgtcatgcggaacgggaaaccccatagatgac
tgctggcggtgcgatcgcaactggatacgccaccgcaggcgcctggctgactgcgccata
ggcttcggccggaacgccgtcggcggcagagatggcagatattacgtagtcaccgacccc
agcgatgacgaccccgttaacccccgaccaggcaccctccgccacgccgtgattcaggac
cggcctctctggatcgtcttcaaacgtgacatggttatcacactaaagcaagagctaatc
atgaacagcttcaagaccattgacgggcgcggagccaatgtccacatcgccaatggcgca
tgcttaaccattcaatttgtgacgaatattatcatccacgggctccatattcacgattgc
aagccaacgggcaacgctatggtgcggagttctccttcgcattacggatggaggaccagg
gctgatggcgatgggatttcgatttttgggtcgagtcacatttggattgatcacaattcg
ctgtcgagctgttctgatgggctgattgatgctatcatggggtccactgcgattaccatt
tctaacaattacttcagtcatcacaatgaggttatgttattgggacacagtgattcgtac
tcgagagataaggttatgcaggtgactgttgcctacaaccatttcggagagggcctaacc
caaagaatgcctaggtgtagacatgggtatttccatgtggtaaacaatgattacacttca
tgggggatgtatgcaattggtggcagtgctaatcccaccatcaacagccaaggcaacaga
tttcttgccccaaataacccttttgctaaagagataacaaagcgaatagtgaatgcggat
gaccatagatggaagggctggaactggagatcagagggtgatcttctgctaaacggcgcc
tatttcaccccatcgggtcgtggtgcagctgccaactacgccagggcctcaagtctagca
gccaaatcctcttccttagtagcaaccctcacggctgaggctggggtacttcattgccgc
aaaggcgtccagtgctga
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