Sesamum indicum (sesame): 105163538
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Entry
105163538 CDS
T04135
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105163538
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sind01009
]
105163538
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105163538
03036 Chromosome and associated proteins [BR:
sind03036
]
105163538
Protein phosphatases and associated proteins [BR:
sind01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
105163538
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
105163538
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
105163538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
105163538
NCBI-ProteinID:
XP_011080237
UniProt:
A0A6I9T9V7
LinkDB
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Position
LG1:11661443..11669199
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AA seq
518 aa
AA seq
DB search
MSSGDGGEVASAAAGPPTPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATGDR
GGRVVLFERTDMKEHGGSRRDLERMDYPVSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI
NKIRWCQMANGALFLLSTNDKTIKFWKVQEKKIKKVADINVDPSKAAGTGGIASSSVSSS
PKPYLANGGCSDRPYSSLSNDLSFPPGGIPSLRLPVVVTSSETSLVARCRRVYAHAHDYH
INSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHC
NMLAYSSSKGSIRLIDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDVKFARDGRY
LLSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVAT
GSYSNLFRVFGCAAGSTEATTLEASKNPMRRQVQTPSRPSRSLSSSITRVVRRGGESPGA
DANGNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcggtgatggtggagaggtggcatcagctgcggcgggtccacctacgccgcta
gaatggaaattctctcaggtcttcggcgagcgaacggccggcgaggaagttcaagaagtg
gatatcatatctgccattgagtttgataaaactggtgaccatctggctactggtgatcgt
ggtggaagggtggtgttatttgaaaggacagatatgaaagagcatggtggaagtcgaaga
gatttagagaggatggactatccagttagtcgacacccagagtttcgttacaaaaccgag
tttcagagccatgagcctgagtttgattatctcaagagtttggagattgaggagaaaatc
aacaaaattcgatggtgccagatggctaatggtgccctctttcttctttctactaatgac
aaaaccattaagttttggaaggtccaagagaagaaaatcaagaaagttgctgatataaat
gtagacccatctaaagctgctggcaccggtggtattgcaagttctagtgtttcttctagt
cctaagccgtatcttgctaatggtggctgttcagatcgaccttacagttctttgagcaat
gacttgtcctttccacctgggggcatcccctcactccgattaccagtggtagtgacaagc
agtgagaccagtcttgttgcaagatgtaggagagtatatgctcatgcgcatgattaccat
atcaattccatctctaataacagtgatggtgagacatttatatcagctgatgatctccga
ataaatctttggaacttggaaataagcaatcaaagtttcaatattgttgatgtgaagcca
gcaaatatggaggatctgactgaggtgataacatcagcagaatttcatcctacccactgc
aacatgttagcatatagtagttcaaagggatcaattcgtctcattgatttgcgacaatcc
gcattgtgcgattcacattctaaactatttgaggagcaggaggcgcctggctcgagatca
ttttttactgagataattgcttcaatttcagatgttaagtttgcaagggatggcagatat
ctactgagtcgtgattacatgacccttaagttgtgggatattaatatggattctggtccg
gtggcgaccttccaggttcacgagtatttaagacccaagctgtgcgacttgtatgaaaat
gattccatttttgataaatttgaatgttgcctgagtggtgatggtcttcgagtggcaact
ggttcttacagcaatttatttcgcgtctttggttgtgctgcgggcagtactgaggcaact
acgctggaagcaagcaaaaatccaatgagaaggcaggtccagaccccttccaggccttcc
agatccctgagcagtagcatcactcgtgttgtgagaagaggtggagaaagtccaggagct
gatgccaatgggaattcattcgatttcacaacgaagctgctccacctggcatggcaccca
tctgaaaactccatcgcttgtgctgctgcaaatagcttgtatatgtactatgcatag
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integrated database retrieval system
