KEGG   Sesamum indicum (sesame): 105163640
Entry
105163640         CDS       T04135                                 
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03013  Nucleocytoplasmic transport
sind03015  mRNA surveillance pathway
sind03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105163640
  09122 Translation
   03013 Nucleocytoplasmic transport
    105163640
   03015 mRNA surveillance pathway
    105163640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sind03019]
    105163640
   03041 Spliceosome [BR:sind03041]
    105163640
Messenger RNA biogenesis [BR:sind03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     105163640
Spliceosome [BR:sind03041]
 Complex C
  Other components
   EJC/TREX
    105163640
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 105163640
NCBI-ProteinID: XP_011080365
UniProt: A0A6I9TCK5
LinkDB
Position
LG6:complement(4045622..4049308)
AA seq 199 aa
MANAEVEAVDFEPEDDDLMDDDVGDGSPNRTSASIPRLKSAIAGGGSYSEPRKTKGRGFR
DEAAAKADRNARMSARFDSLVTEGGPGPVRSIEGWIILVAGVHEEAQEDDLHNAFGEFGE
IKNLHLNLDRRTGFVKGYALIEFEKFDEAQRAINEMDGTELLTQTLNVDWAFSKGPFRRR
SMRKRSPRGHRSRSPRRRF
NT seq 600 nt   +upstreamnt  +downstreamnt
atggcgaacgcggaggtagaggcagttgatttcgagcctgaggacgatgatctcatggat
gacgacgttggagacggctcccccaacagaacctccgcctccattcctcgcctcaaatca
gccattgccggtggcggttcctactcggagccaaggaagaccaaaggtcgtggattccgc
gacgaggcggctgctaaggctgaccgtaatgctcgcatgtctgcccgctttgactccctc
gttacggagggtggtcctggccccgtacgatctattgaaggatggattattctggttgct
ggagttcatgaagaggcacaagaggatgatttacataatgcatttggtgagtttggggag
ataaagaatttgcacttgaatcttgaccgacgcactggatttgttaagggctatgcgcta
attgagtttgagaagtttgatgaggcccagagagctataaatgaaatggatggaactgaa
ctgctcactcagaccctaaatgttgattgggcattcagcaaaggcccattcaggaggaga
agtatgaggaaaagatcacctcgtggtcatcgttctaggagtccaaggaggagattttga

DBGET integrated database retrieval system