KEGG   Sesamum indicum (sesame): 105163766
Entry
105163766         CDS       T04135                                 
Name
(RefSeq) protein transport protein SEC13 homolog B
  KO
K14004  protein transport protein SEC13
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03013  Nucleocytoplasmic transport
sind04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105163766
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    105163766
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sind03019]
    105163766
   04131 Membrane trafficking [BR:sind04131]
    105163766
Messenger RNA biogenesis [BR:sind03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     105163766
Membrane trafficking [BR:sind04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    105163766
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    105163766
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    105163766
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_Vps41 ANAPC4_WD40 WDR55 WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th EIF3I Beta-prop_HPS5 Beta-prop_WDR36-Utp21_2nd eIF2A WD40_2 WD40_RFWD3
Other DBs
NCBI-GeneID: 105163766
NCBI-ProteinID: XP_011080528
UniProt: A0A6I9TD26
LinkDB
Position
LG1:11875348..11877826
AA seq 301 aa
MPGQKIETGHQDIVHDVAMDYYGKRLATASSDNAIKIIGVSNSRSQHLATLTGHRGPVWQ
VAWAHPKFGSLLASCSYDGKVVIWKEGNQNEWIQAHVFDDHKASVNCISWAPHELGLCLA
CGSTDGNISVFTARSDGGWDKSQIEQAHPVGVTSVTWAPSTALGALIGSGLLNPVRRLAS
GGCDNTVKVWKFDNGTWRMDCFPALKMHTDWVRDVSWAPNLGLPKSVIASASEDGKVIIW
TALKEGDQWNGKILKDFGSAVWRVSWSLTGNTLAVADGKSNITVWKEAIDGEWQQVTAVE
S
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcctgggcaaaagattgagacaggtcaccaggacattgttcatgatgtggcaatggat
tattatggcaaacgtctggctactgcttcttctgacaacgctattaagataattggagtt
agcaactcgagatctcagcaccttgctactttaactggtcaccgagggccagtatggcaa
gttgcatgggcccatcctaagtttgggtcgctccttgcttcttgttcttatgatggaaag
gttgtaatatggaaggaaggcaatcaaaatgagtggattcaggctcatgttttcgacgat
cataaagcctctgtgaattgtatttcttgggctcctcatgagctaggtctttgtctggca
tgtggatccacagatggcaacatctcggtgttcactgcaagatcagatggtggatgggac
aaatcacaaattgaacaggctcatccagttggggttacatcagtcacatgggccccatca
actgcccttggtgctcttataggttctggcctactcaatcctgttcggagactagcatct
ggtggctgtgataatacggtgaaagtatggaagtttgataatggaacttggaggatggat
tgcttccctgctcttaaaatgcatactgattgggtgagggatgtttcctgggcacccaac
ttggggcttcctaagtcagtgattgcaagtgcttctgaagatggaaaggtaataatatgg
acggcactcaaggaaggtgatcaatggaatggtaagattttgaaggactttggatctgct
gtttggagggtctcttggtcgctgactgggaacacgctcgctgtggctgatgggaaaagt
aacatcacagtatggaaagaagcaatagatggggagtggcagcaggtgactgcagttgaa
tcataa

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