Sesamum indicum (sesame): 105163807
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Entry
105163807 CDS
T04135
Name
(RefSeq) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105163807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105163807
03009 Ribosome biogenesis [BR:
sind03009
]
105163807
Messenger RNA biogenesis [BR:
sind03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
105163807
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
Pre-60S particles
RNases
105163807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Dicer_PBD
KinB_sensor
Motif
Other DBs
NCBI-GeneID:
105163807
NCBI-ProteinID:
XP_011080591
UniProt:
A0A6I9TII5
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Position
LG6:complement(5275156..5282587)
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AA seq
251 aa
AA seq
DB search
MDQLSNSFSLLELDAEDARGQSSIVTTAADSCELPDSDKGIEDVLEDGNWSRNENADEQT
LEPIPIEYKMPLVWIDLEMTGLNIEVDRILEIACVITDGNLTKSIEGPDLVIHQTKECLD
KMGEWCQEHHSESGLTEKVLQSTTSEQEAEKQVIEFVKRHVGTYTPLIAGNSVYMDLLFL
RKYMPELAALFSHVLVDVSSIKALCLRWYPREKRKAPQKENKHRAMDDIKESIAELKFYK
ENIFKSSKSKK
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggatcagctgtcaaattccttttcattgcttgagttggatgctgaagatgccagggga
cagagttcaattgtcacgactgctgctgatagttgtgaactaccagatagtgataaagga
atagaggatgttttagaagatggaaactggtcgaggaatgagaacgcggatgaacaaacc
ttggaaccgattcccattgagtacaagatgccacttgtttggattgacctggaaatgacc
ggtttgaatattgaagttgatagaattttggagattgcttgtgtgattacagatggaaat
ttaaccaagtcaattgagggtccggatttggttattcatcaaacaaaggagtgtcttgat
aaaatgggagaatggtgtcaagagcatcattcagaaagtggtttaacagagaaggttctt
caaagtacaacaagtgaacaagaagctgaaaagcaggttattgaattcgtcaagagacac
gtgggcacatatacacctcttattgcaggaaattctgtctatatggatcttctattctta
aggaagtatatgccagaattggctgcccttttctcccacgttcttgttgatgtcagcagc
atcaaggcattatgtctgcgttggtacccaagagaaaagagaaaggctcctcagaaggaa
aacaaacacagagcaatggatgacatcaaggaaagtatagcagaactcaagttctacaag
gagaacatattcaaatcctccaagtcaaagaaatga
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