Sesamum indicum (sesame): 105163938
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Entry
105163938 CDS
T04135
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03015
mRNA surveillance pathway
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105163938
09122 Translation
03015 mRNA surveillance pathway
105163938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105163938
Spliceosome [BR:
sind03041
]
Complex A
Other components
Complex A specific factors
105163938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
105163938
NCBI-ProteinID:
XP_011080778
UniProt:
A0A6I9TJ01
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Position
LG6:7046677..7052493
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AA seq
456 aa
AA seq
DB search
MSGMYGQEGDGSGAPPMGGGGGYGGSEGGGYGGYGSGGAGYGGNSGGGGGYGNRGGGSGG
YGGRGGGGGGYGGNRGDRGGGYQGDRGGGYQGDRGGRGGGRGGSRGGGSGREGDWRCPNQ
SCGNLNFARRTECNKCGAPSPAGSDDRGGRGGGGYNRGGRGGSYDNNRGRGNHYDSGSGR
SGNGYDGGNGRGGSYGGNQGRDDGGYGQGPPVAPPSYGGSSGSYAPPPNAYGGNPSYAPD
AVPPPTSYTGGPASYPPSYGAPTGYGGDYLGDSRGSGRGGQTGGYGGGPRNPGGYGGSPA
EASEKVKQCDENCGDSCDNSRIYISNLPPDVTIEELRELFGSIGQVARIKQKRGYKDQWP
WSIKIYTDEQGNNKGDAVLSYEDPSAAHSAGGFFNMHDLRGYKISVSMAEKSAPKAPAYG
SGGGGRGNYGRRDNYRDGGSSGPDRNYHGGNRARPY
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtatgtacggtcaagaaggtgatggatctggcgcaccgcctatgggtggaggc
ggaggttatggtggctctgaaggcggtggatacggaggttatggaagtggtggggctgga
tatggcggaaatagtggcggtggcggagggtatgggaaccggggaggtggtagtggtggc
tacggtggaagaggaggcggcgggggcggatacggcggtaatcgaggagaccgtggcggt
ggttaccaaggtgaccgtggaggtggttaccaaggagaccgtggcggacgcgggggcggc
aggggaggcagccgtggtggtggaagcggcagagaaggtgattggcgttgccctaatcaa
agctgcgggaatttgaactttgccagaagaactgagtgtaacaaatgcggtgcaccatct
ccagctggtagtgatgatcgtgggggtagaggtggtggcggttataacagaggtggaagg
ggtggtagttatgataacaatcgaggtagaggtaaccactatgatagtggcagtggtcgg
agtgggaatggttatgatggtgggaatggcagaggtggttcttatggtggtaatcaagga
agggatgatggtggttatggacagggtcctccggttgctcccccatcttatggtggttct
agtggaagttatgcaccacctcctaatgcatatggtgggaaccccagttatgcgcctgat
gcagttcctccacccacgagctatactggggggcctgcttcatatcctccatcatatggt
gctcctactggttacggtggtgattatcttggtgatagtcgtggcagtggacgaggtggt
caaactggtgggtatggtggaggtcctcgaaacccaggaggttatggtggttctccagcc
gaggcttctgaaaaagtcaagcagtgtgatgaaaattgtggggattcctgtgataactcg
agaatttatatatcaaatttgcctccagatgtcactattgaggagcttagagaacttttt
ggaagtattggccaagttgcaagaatcaaacaaaagcggggctacaaggatcaatggccc
tggagcatcaaaatatataccgatgaacaaggaaacaacaaaggagatgcagttttgtct
tatgaagatccatctgctgcacattctgctggtggttttttcaatatgcatgatttgaga
ggatacaaaattagcgtttcaatggctgagaagtctgctccaaaggctcctgcatatggt
tctggcggcggtggtagaggcaattatgggaggagagacaactacagagatggtggttct
tctggtccagatagaaattatcatggtggaaaccgtgcacggccatactaa
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