Sesamum indicum (sesame): 105164050
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Entry
105164050 CDS
T04135
Name
(RefSeq) uncharacterized protein LOC105164050
KO
K24738
rabconnectin-3b
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
105164050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sind04131
]
105164050
Membrane trafficking [BR:
sind04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
105164050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
ASA1
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
PAC11
EIF3I
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
105164050
NCBI-ProteinID:
XP_020550135
UniProt:
A0A8M8V1A7
LinkDB
All DBs
Position
LG6:7954580..7965948
Genome browser
AA seq
1518 aa
AA seq
DB search
MKCKSLACIWSGSPPVHRVTAVAALHEPPTLYTGGSDGSIIWWNLVSSQQEAEMRPVALL
CGHAAPIADLGICSPVQESENGKLANSSNVSSVPNSVNCESLISACSDGVLCVWSRSSGH
CRRRRKIPPWAGSPFMIKPLPDNRRYVCVTCSFVSQEHGLLDAVEGTESSVDRELQNPNP
SKCTVIIIDSFTLTIVQTVFHGYITIGPLKSMAVVLPSEDVEKQLVMIIDSFGKVLYLPI
MKDTHPKVQNVPVVPKDSSLAEVMDWADDSIENGSVLSFSKCGCVVALVHRTYCIFRQAD
SGTVLGKIPFSDDQLCFEDKLYVIGGVFLRDDTYISIDGFVEEFIAWNNRGAAVIYRISY
PSNIFKFEPLVVVPSVSYPSDVRLSFSFIPVNKYLLRVESVCFYVEEQKFWRPHVTIWLL
PPQNENYGKLPLECEMFGEGNLFDQWVMDSSSSTTQGTNDDALEEGTVMLDGMTPLRNTV
LSPCDTDSKYSSNRGYVTYPGAQLVSSSMVISENYVAPHAIVYGFLSGDIEIVRFHMFFM
AFDSHIENLPHEADSHGQKHRLRGHTGAVLCLASHQMVSRSAGCSLNHVLLSGSMDYTVR
MWDLDSGNPIAVLHQHVAPVRQIILPPRQSEYPWSDCFLTVGDDSCVALASLQTLRVERL
FPGHLYFPAKVLWDGVRSYIACLCPNRSEKGDALDILYIWDVKTGARERLLRGAAAHSMF
DHFVKGINDSFLSGNLMNGNTSASSLVFPVTEPMKLSQSHPKVSGKGISSQISTARNSEP
NETSNAMKGSSARSGCFTSVVFQSDKHPIKSSSPFPGVSTLCFDLTSLMSLCSMHELSED
ISHIGGRIYVKGAGTSTPKGDAYQKANAPSKELEMEIPSPRHVNGKSSGASDGPSVKLEH
HQWVRSLEGCLLQFSLSFLHLWNVDDELDNLLITEMKLKRPDSFIVSSGILGDRGSMTLT
FPGSDLTLELWRSSSEYSALRSLTMVSLAQHLISLSHSCSSASSALAAFYTRKLAEKFSD
IKPPQLQLLVSFWQNEFEHVKMAARSLFHCAASRAIPLPLSYSRANQLLNRDIHPSGISE
KKYDNTTAACLISDAKMENEVDFVKEESEITSWLESYEEQDWISCVGATTQDAMTSQIIV
AAALAVWYPSLVKTSLAMVTVHPLVKLVMAINEKYSAAAAEILAEGMESTWKACICSEIP
RLMADVFFQVECVSSTSANASSQNSAPSLSIRETLVGILLPSLAMADVPGFLHVIESQIW
STASDSPVHVVSLMTLIRVVRGSPRNLAPYLDKVVIFILQTMDPGNSTMRKSCLQSSMTA
LKEVVRVFPMVALNDTSTRLAVGDAIGEINNASIRVYDMQSMNKIKVLDASGPPGLPSLL
GGTLETATTTAISALSFSPDGEGLVAFSETGLMIRWWSLGSVWWEKLSRNFVPVQCTKLI
FVPPWEGFSPNSTRSSIMASVLRDDGRGNSPRYNKALSETDRLKLLIHNLDLSYRLEWVG
ARKIKLLQHSHELGTFQL
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtaaatcgctggcatgcatatggtcaggatcaccaccggttcaccgagtcacc
gctgtcgccgcactccacgaaccgcccactctttacaccggtggatccgatggctccatc
atctggtggaacctcgtttcctctcagcaagaagcggaaatgagaccagttgcattgctg
tgtggtcatgctgctccaatagctgatctagggatttgttctcctgttcaggaatctgaa
aatggaaagttggctaattcgagtaatgtctcatcagttcctaattcagtcaattgtgaa
tcgctaataagtgcttgcagtgatggtgtattgtgcgtttggagcagatcaagtggacac
tgcagaaggagaagaaaaattcctccttgggcagggagtccgtttatgattaagccattg
ccggacaataggagatatgtatgtgttacctgttcttttgtcagccaagaacatgggttg
cttgatgcggtggaaggaactgaatcttcggtggacagagagttacaaaacccaaatcct
tcgaagtgtacagttataatcattgactcatttacccttacaatagttcaaacagttttc
catgggtatataactattggacctttgaagtccatggctgtagttttgccctcagaagac
gtggagaagcaattggtaatgattattgattcatttggtaaggtactatatttgccaata
atgaaagacactcatccaaaggtgcaaaatgtgcctgtcgtaccaaaggattcctcactt
gcagaagtaatggactgggcagatgattccattgagaatggatctgtactgtctttttca
aagtgtgggtgtgttgtggcccttgtgcatcgaacatattgcatatttaggcaagcagac
agtggaactgttttaggcaagatacctttttcagatgatcaactgtgttttgaagataaa
ttatatgtaataggtggtgtattcctaagagatgatacttatatctcaattgatggtttt
gtggaagaatttatagcgtggaataacagaggtgcagctgttatatacaggatatcatac
ccgagcaatatattcaagtttgagcctctagttgtcgtcccatctgtatcgtatccttct
gatgtgagactatccttttcttttatacctgtaaataagtatctgcttcgtgttgagtca
gtttgcttctatgtcgaggaacaaaaattttggagaccgcatgttactatttggctctta
cctccgcaaaacgagaattatgggaagcttcctttggaatgtgaaatgtttggggaaggt
aatctttttgatcaatgggttatggattcctcttcctctacaactcagggtacaaatgat
gatgccctcgaagaaggaacagttatgctcgatgggatgactccattgagaaatactgtg
ctatctccctgtgacacagatagcaaatactcaagtaatcgcggatatgttacttaccca
ggagctcaactagtatcttcgtcaatggttatatccgaaaactatgtagctcctcacgcc
attgtttatggcttcttgagtggtgatattgagattgttaggtttcacatgtttttcatg
gcatttgattcacatattgaaaatctgcctcacgaagcagattcacatggacaaaagcac
cgtctcagaggccatacgggagcagtgctctgtttagcttcacatcaaatggtgagtagg
tctgcggggtgtagtttaaatcatgttttgctgtcaggtagcatggattacacagttcgc
atgtgggatcttgactctggtaatcccattgctgtattgcaccaacatgtagcaccagtg
cgacaaataattcttcctccacgtcaaagcgaatacccatggagtgattgctttttaact
gttggggatgactcatgtgtcgcccttgcttcacttcagactttgagggtggaaagattg
tttccgggacatctttactttcctgcaaaagtcctttgggatggtgtaagaagttacata
gcatgtctgtgtccaaaccgttcagaaaaaggtgatgcccttgatattctatacatttgg
gatgtaaagacaggtgctcgtgagagacttcttcgtggagctgctgcgcattcaatgttt
gatcatttcgttaaaggaatcaatgatagctttttgtccggaaatttaatgaatggaaat
acttcggcttcctctttagtttttccagtgactgagccaatgaagctttcacaatctcat
ccaaaagtttctgggaagggaatttcttcacagatatccacagcacgtaacagtgaacca
aatgaaacatcaaatgctatgaaaggaagcagtgcacgttcaggttgtttcacatcagtg
gtcttccaaagtgacaagcatccaattaaaagctcttctccttttcctggagtttccact
ttgtgttttgatctcacttccttgatgtctctttgttctatgcatgagttgtcggaagac
atcagtcatattggaggcagaatttatgtgaagggagctggaactagcacacctaaaggt
gatgcttatcaaaaggcgaatgctccttcaaaggaactggaaatggagattcctagccct
cgtcatgtgaacggaaaaagcagtggtgcttcggatggaccctctgttaaattggaacat
caccaatgggttcggtcgcttgaaggatgcctacttcagttcagcttgtcatttctgcat
ttgtggaatgtagatgacgagcttgataacttgctaataactgaaatgaagctcaaacga
cctgattcatttattgtatcttctggaatactgggggataggggttcaatgacattaaca
tttccaggttctgatttaactctagagctctggagatcttcatctgagtattctgccttg
agatcgttaacaatggtgtcccttgcccagcatctgatcagcttatctcattcttgttca
tcagctagtagtgctttggcagcattttatacccggaaacttgcggaaaaattttcggat
atcaaacctcctcagctccagctcttagtaagcttttggcagaatgagtttgaacatgtg
aaaatggctgctcgctctttatttcactgtgctgcttcgcgtgctattcctcttccactg
tcctattcaagagccaatcagcttctaaatcgtgacatacatccttctggaatatcagag
aaaaagtatgataatacaactgcagcatgtctgatatctgatgcgaaaatggaaaatgaa
gtggactttgtcaaggaagagtctgaaataacatcatggttggaatcatatgaagagcaa
gactggatttcctgtgtaggggcaacaactcaggacgcaatgacttctcaaataattgtt
gctgctgcattggctgtatggtatcctagccttgtcaaaacaagccttgccatggtgacg
gtacatccactggtaaaattggtcatggccatcaatgaaaagtatagtgctgcagcagca
gagattttagctgaaggaatggagagtacgtggaaggcttgcatttgttctgaaatacct
cgcctgatggcggacgtattctttcaagttgagtgcgtaagcagtacatcagctaatgca
tcttcacaaaattctgccccatctcttagcattcgggagactttagttgggattcttctt
ccaagcttagcaatggctgacgtacctggatttctgcatgttattgaaagccaaatctgg
tccactgcatctgattcacctgttcatgtcgtgtctctcatgaccttgatcagggttgtc
cgcggttctccaagaaacttagctccatatctggataaggtggtcatttttatattacag
acaatggatccgggtaactcaaccatgcgcaaaagttgtctccaaagttctatgacggca
ttgaaagaagttgtgcgtgtgtttcctatggtagccctaaatgatacatcaacgaggttg
gcagtgggggatgcgattggagagattaataatgctagtattcgggtgtatgacatgcaa
agcatgaacaagataaaggtcttggatgccagtggacctccaggacttccaagtttgctt
ggaggaaccttggaaacggccactaccactgcgatatctgctctaagcttctcaccagat
ggagaggggctggttgctttttctgagactgggttgatgattagatggtggtcactggga
tctgtgtggtgggagaaacttagcagaaattttgttcctgtccaatgcaccaagctgata
ttcgtgcctccctgggaggggttttcaccgaattctactaggtctagcataatggctagc
gtattgcgtgacgatgggcgtggcaattcaccgcggtacaacaaagctttgagcgaaaca
gacaggttgaaacttttgatccacaatcttgatctctcctataggcttgaatgggttggt
gcaagaaaaataaagctcttacaacattcccatgagttaggtaccttccagctgtaa
DBGET
integrated database retrieval system
