Sesamum indicum (sesame): 105164134
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Entry
105164134 CDS
T04135
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03030
DNA replication
sind03410
Base excision repair
sind03420
Nucleotide excision repair
sind03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105164134
03410 Base excision repair
105164134
03420 Nucleotide excision repair
105164134
03430 Mismatch repair
105164134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sind03032
]
105164134
03036 Chromosome and associated proteins [BR:
sind03036
]
105164134
03400 DNA repair and recombination proteins [BR:
sind03400
]
105164134
DNA replication proteins [BR:
sind03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105164134
DNA Replication Termination Factors
ELG1-RFC complex
105164134
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105164134
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105164134
Check point factors
HRAD17(Rad24)-RFC complex
105164134
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
nSTAND_NTPase5
AAA_lid_RFC1
Mg_chelatase
AAA_16
Viral_helicase1
AAA_5
RuvB_N
RCF1-5-like_lid
AAA_11
nSTAND3
AAA_25
AAA_19
AAA_assoc_2
AAA_28
MeaB
Rad17
DNAX_ATPase_lid
ABC_tran
bpMoxR
AAA_18
AAA_24
AAA_3
IstB_IS21
AAA_30
AAA_7
NTPase_1
RNA_helicase
DO-GTPase1
KTI12
AAA_29
Motif
Other DBs
NCBI-GeneID:
105164134
NCBI-ProteinID:
XP_011081016
UniProt:
A0A6I9T9L8
LinkDB
All DBs
Position
LG6:8711192..8714386
Genome browser
AA seq
314 aa
AA seq
DB search
MYRPTKVADIVGNEDAVGRLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNYRE
AVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRTMEI
YSNSTRFGLACNTSSKIIEPIQSRCALVRFTRLSDQEILGRLMVVVAAEKVPYVPEGLEA
IIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQILEGKFDDACA
GLKQLYDMGYSPTDIITTFFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYLQMCGL
LAKLAMVRETAKAA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtatcggcctaccaaggtggcggatattgtgggaaacgaggacgccgtcggcaggctc
caagtcattgcccgggatggcaacatgcccaacctcattttagcgggtcctcctggaact
ggtaagactactagtatattggcgttagctcatgaacttctaggaccaaattatagggag
gctgtcttagagctaaatgcatcagatgaccgggggattgatgttgtcagaaacaaaata
aagatgtttgctcagaagaaagtcacattgccacctggaaggcacaaaataataattctg
gatgaagctgacagtatgacgtctggagcgcaacaagccttgaggagaactatggaaata
tattcgaattccacacgttttgggctcgcttgtaacacatcttcaaagattattgagcct
attcaaagtagatgcgcgcttgtccggtttactagattatctgatcaagagatccttgga
cgtctcatggtggtggttgcagcagaaaaggtaccttatgttccggaaggtcttgaagca
attattttcaccgctgatggtgatatgcggcaggcattgaacaacttgcaagcgacaaac
agtgggttcggttttgtcaatcaagaaaatgttttcaaggtttgtgatcagccccatccc
ttgcatgtgaagaacatggtacggcaaatacttgaggggaaatttgatgatgcatgtgct
gggctgaagcagctttatgatatgggctattctcctacggatataatcactacctttttc
cgtattataaagaactatgatatgcctgagtatctaaagttggaattcatgaaggaaact
ggattcgcccacatgaggatttgtgatggagtcggttcttatctccagatgtgtggtttg
ctggccaaacttgcaatggtacgagaaacagccaaagcagcttag
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