Sesamum indicum (sesame): 105164294
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Entry
105164294 CDS
T04135
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105164294
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sind01002
]
105164294
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105164294
03036 Chromosome and associated proteins [BR:
sind03036
]
105164294
03400 DNA repair and recombination proteins [BR:
sind03400
]
105164294
Peptidases and inhibitors [BR:
sind01002
]
Metallo peptidases
Family M67
105164294
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
105164294
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
105164294
BRISC complex
105164294
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
105164294
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
105164294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
105164294
NCBI-ProteinID:
XP_011081221
UniProt:
A0A6I9TC92
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All DBs
Position
LG1:complement(12197254..12202563)
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AA seq
424 aa
AA seq
DB search
MSLTSVKMSEEVWLTCLTHALSTETEEIMGLLLGDIQHSKNGTVTALIWGALPQPRSDRQ
KDRVETNPEQLTAASVHAERMTMATGTTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCFSEDAQKVGRIQVIAFQSLDGKHNHTMKPVSLVPVQKSSVIDIESSISSS
DNTMPVFGSSRGESMEQDTGDSAATSIASKGAGKSPRLGGFFANADAKTGNNYNANSLNN
VIHDLDPMDMSEGMQEAMHLSNLEMSGAEFVRKEIPLHVLPTSSLLNLDSPLSSFTNLQR
VLYEEERTAYNQAMAQNTSNGKVHPLSFIHHTSTYKASMCKMIEYCLSPAMNALQDRLRE
NEIQLKLLAEEANLLESELLRGSPSNSSPQSPSQSLRSGGHRDLYPTDFSHLKNASGSRI
RRGA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaacgagtgtgaagatgtcagaggaagtgtggttgacgtgtctgacccatgca
ttgtccactgagacggaggagatcatgggccttcttcttggtgatattcagcattcaaag
aatggtactgtaactgcattgatttggggagcacttccacagccacgttcagatcgacag
aaggatagggtagagacaaacccggagcagctgactgctgcatcagttcatgctgagaga
atgacaatggcaacaggaaccacaactagagtgattggctggtatcactcacatcctcat
attacggtcctcccttctcatgttgatgtgcggactcaggcaatgtaccagctattggat
tctggattcattgggttgatattttcctgtttcagcgaagatgctcaaaaggttggaagg
attcaagttattgcctttcaatctttggatggcaagcataatcacacaatgaaacctgtt
tctcttgtccctgtacaaaaaagttctgttatagacatagaatcatctataagttcctca
gacaatactatgcccgtgtttggttcttccagaggagaaagtatggaacaagacactgga
gattcagcggcaacttctatagcttccaagggcgcgggcaaatcgccacgattgggaggt
ttttttgctaatgctgatgccaaaacaggaaataattacaatgccaacagtttgaacaat
gtaattcatgatttggatcccatggatatgtcagaaggtatgcaagaagcgatgcatctg
tcaaatttggagatgagtggggcagaatttgttagaaaggaaattccgctgcatgttctg
cctacgtcgtcccttcttaatcttgattctcctttgtcatcctttacaaatcttcaacgc
gtactgtatgaagaggagaggactgcgtataaccaagcaatggctcaaaataccagcaat
ggcaaagttcaccctctttctttcattcatcacacatcgacgtacaaggcttccatgtgc
aaaatgattgaatattgcttgagccctgctatgaacgctcttcaagatcgcttgagagaa
aatgaaattcagctaaaattgcttgcggaagaagccaaccttctggagtcggagctttta
agaggaagcccttcaaactcctctccacagtctccatctcaatcgctccgaagcggtggc
caccgagacttgtaccctaccgacttcagccatctgaaaaacgccagcggtagccgaatc
agaagaggagcatag
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