Sesamum indicum (sesame): 105164639
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Entry
105164639 CDS
T04135
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sind03009
]
105164639
Enzymes [BR:
sind01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
105164639
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
Other ribosome biogenesis factors
105164639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
FtsJ
Methyltransf_31
Ubie_methyltran
RrnaAD
PCMT
TRM
RsmF-B_ferredox
Methyltransf_4
Cons_hypoth95
ASPP2-like_RA
NAD_binding_6
Motif
Other DBs
NCBI-GeneID:
105164639
NCBI-ProteinID:
XP_011081636
UniProt:
A0A6I9TFL0
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All DBs
Position
LG6:complement(16430571..16435117)
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AA seq
503 aa
AA seq
DB search
MARRNPVTSAAKERKPEEKRQSNAERSAYFARREAAKVLRSMLQGDARRRAVGSIKSLVY
SPSIRNKKATFALVCQTLKHLSLIKDVMDGANVLSAKWKKQKELMYIITYDLLFGQKGSF
TGDAEKYLMLKKDALQSALSRILRRKGVKDVEDLVALDKVSELQKPRYVRVNTLKIDTEF
AIRELRQQYAVQKDDIVPDLLILPPGADLHNHPLVMNGSIFLQGKASSMAAVALGPKPGW
EVIDACSAPGNKTVHLAALMKGEGKILACELNKERVKRLKDNVKLAGATNVKVMHEDFLN
LDPRHPSYSKVRAILLDPSCSGSGTAFERLDHLLPSHNAGGTDLVDIKRLRKLASFQKKV
LEHALSFPAVERIVYSTCSIHQIENEDLVNSVLPIASSYGFQLATTFPQWPRRGLPTFDG
AEHLLRTDLTIDKEGFFIALFVREGIHQPEDCSKNAENHAGSVTRKSSCRTRKPLNIFIA
KMLKVSPHQQFTLWRKRAQAPAT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggctcggagaaatccggttacatcggcggctaaagaacggaagccggaagaaaagcgg
caaagcaatgccgaacgatcggcttacttcgctcggagagaagccgctaaggtcttgcgc
agcatgctccagggggacgctcggcgccgagccgtcggctcgattaagtcgcttgtttac
agcccttccatcaggaacaagaaggctacttttgccttggtctgccaaactctcaagcat
ctctcacttattaaggatgtcatggacggtgcaaatgttctaagtgccaagtggaagaag
cagaaagaattaatgtatatcatcacatatgacttactctttggacagaaaggttcattt
actggtgatgccgagaagtatctcatgctaaaaaaagatgcattacaatcagctctatca
cggattttaaggcgcaagggggtgaaagatgtagaagacttggtggctcttgataaagtt
tctgaattgcagaaacctcgttatgttcgtgtgaatactctgaagatagatacggagttt
gccatacgcgaattaagacaacaatatgccgtccaaaaggatgacatagtcccagaccta
ttgattctcccaccaggtgctgatttacacaatcatcccctagtgatgaatggaagtatt
ttcttgcagggaaaggcaagctctatggctgctgtagctcttggacccaaacctggatgg
gaggtcattgatgcctgttcagctcctgggaacaaaacagtgcaccttgctgctcttatg
aagggcgagggaaaaattttagcttgtgaacttaacaaggaaagggttaagcgcttgaaa
gataatgtcaaactggctggagccacaaatgtaaaagttatgcatgaagatttcttaaat
ctcgatcctagacatccttcttattcaaaggttcgtgctatacttttagatccatcatgt
tccggatcagggacagcttttgagagattagatcatttacttccatcacataatgcaggt
gggactgatctggttgacataaagcgactgcgaaagcttgcaagttttcagaagaaggtg
ctggaacacgcgttatctttcccagcagtggagagaatcgtttacagcacgtgttcaatt
catcagattgaaaatgaagatctcgtcaactctgttctgcctatagcttcatcctatggg
tttcaactggcaacaacatttccgcagtggcctcgccgtggcctcccaacgtttgatggg
gctgaacacttgttaaggacggatttgaccatagacaaagaaggtttcttcatcgctctg
ttcgtccgggaaggcattcatcagcctgaagactgtagcaaaaatgcagaaaaccatgca
ggcagtgtcactaggaaaagctcctgtaggactagaaaacctttgaacatttttattgcc
aaaatgcttaaagtttcgcctcaccaacaattcacactctggcgaaagagagcacaggca
ccagcaacctaa
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