Sesamum indicum (sesame): 105164704
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Entry
105164704 CDS
T04135
Name
(RefSeq) RNA polymerase sigma factor sigC isoform X2
KO
K03093
RNA polymerase sigma-I factor
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105164704
Transcription machinery [BR:
sind03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
105164704
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
105164704
NCBI-ProteinID:
XP_011081724
UniProt:
A0A6I9TAP1
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Position
LG6:16831498..16835333
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AA seq
556 aa
AA seq
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MGFRLNLKWSGLSVQSPFSTSTSSLPYTYPCRGRDTSYILARLSASSVLYGETETLNDAS
RVHVCSSSPQLLENYYLGTRETKVAVGKGSSDGLSSLLEKHIETSNSEDKLAYLTSLQAT
QLSQFRLLMKNLDMLEDMFSDSNVVRLERDILEQLERLGALRLFYSCLSRTLKSSTSFDL
SNATTELVEEPKVNDSVDNHVGEVVRSGRKELRKLRRKRMLDKESGITTQELPTVTISKQ
HKYASARRASRSRNKRQRIARNEAEMSSGVKLVAELEKVRTILEEETGQVASLSSWAEAA
GIKKKELQQNLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQGAER
FDQSRGYKFSTYVQYWIRKSMSTLVARHARGVRIPCTLSKVINQVQRARKALSTSNGKYP
DDSDIAKYTGLSIAKIMSASKCLRVVGSIDQKIGEAISAKYMEIAPDTSILSPEETVIRQ
HMINDVHRLLNGLEPREKQVLILRFGLGNRQCKSLEEIGRLFCVSKEWIRKIERAALAKL
RNEDSLKILSHYVYMQ
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgggttttaggctaaacctcaaatggagtggtctttcagttcaatcccccttctccaca
agtacatcgtctctgccttacacatacccttgtagaggcagagatacctcctacatcttg
gcgagattgtctgcttcatcagttttatatggagagactgaaacacttaatgatgcttcc
agagtacatgtttgttcttcgtcccctcagcttttggagaattattacttgggaactaga
gaaacaaaggttgcagttgggaagggctcgagtgatggtttatcaagtttacttgaaaag
cacattgaaacatctaacagcgaggataagttggcgtaccttactagcttacaagcaacc
caattatcgcagttcagattattaatgaaaaatcttgatatgttggaagacatgttttcc
gattctaatgtggtaaggttggaaagagatattctggagcaattagaaagacttggagct
ttaagattgttctattcatgtctatccaggaccctgaaatcctcaacttcttttgatttg
tctaatgcaacaactgagcttgttgaagagcccaaggtaaatgattcagtggataaccat
gtaggcgaagttgttcgatctggaagaaaagaactcagaaaattgaggagaaaaagaatg
ttggataaggaaagtggtattactacgcaagaattgcctacagtaaccatttcaaaacag
cataaatatgcctctgctagaagagcttcaagatctagaaataaaagacagagaattgct
agaaacgaggcagaaatgtcgagtggagttaagttggtagcagaactggaaaaagtcagg
acgatactggaagaagaaactggtcaggtagctagcttgagcagctgggcagaagctgct
ggaattaaaaagaaggaattgcagcagaatttgcattatggttggcattgcagggacgag
cttctaagaagtacacgctccttggttttgtttattgcaagaaactattggggacttgga
gtagcctttgaagaccttattcaggcaggaaatataggggtcttgcaaggtgcagaaagg
ttcgatcagtcaaggggatacaaattctcaacctacgtccagtactggattaggaagtca
atgtcaacactggtggcgagacatgccagaggagtccgaattccttgcactttaagcaag
gttataaatcaagtacaaagagcacgcaaggcccttagcaccagcaacgggaaatatcca
gatgactctgatattgccaagtatactggcctatccatagctaaaattatgtcggctagc
aaatgcctcagagttgtgggatctatagatcagaaaataggggaagcaatcagtgcaaag
tatatggaaattgcacctgatacatcgatactgagcccagaagaaacggtgatccgacaa
cacatgataaacgacgttcacagacttcttaatgggttggagccaagagagaagcaggtt
ttgatactaagattcggactaggaaaccgtcagtgcaaatcgctggaggaaatcgggagg
ctgttttgtgtaagcaaagagtggataagaaaaatagagagggcagctcttgcaaagttg
aggaatgaggattctctcaaaattttgagccattatgtatatatgcaataa
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