Sesamum indicum (sesame): 105164746
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Entry
105164746 CDS
T04135
Name
(RefSeq) exosome complex exonuclease RRP46 homolog
KO
K12590
exosome complex component RRP46
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105164746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105164746
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105164746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105164746
NCBI-ProteinID:
XP_011081797
UniProt:
A0A6I9TBI1
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Position
LG6:17120337..17123774
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AA seq
243 aa
AA seq
DB search
MDLEREGGRGANQLRPIDCTRNVLSRAHGSASCSHGETRVLAAVYGPKAGTKKNENPEKA
CIEVIWKPKTGQIGKSEKEFEMILKRTLQNICLLTVHPNTTTSIIVQVVHDDGSLLPCAI
HAACAALVDAGIPLKYLAVAICCCLTESGQIILDPSKLEEQRMKGFVCIAFPSSIQSVIS
QGSADVGGESVGNGVITSLTHGVMPVDDYFQCVEQGRAAIIPLSNILKKRLQSQPASKQS
KAG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggatttggagagagaaggggggcgtggggcgaaccagttgagacccattgactgtact
cgcaacgttctcagccgtgcccatggctctgctagttgttctcatggggagaccagggtg
cttgctgctgtttatggacctaaagctgggacaaaaaagaatgagaacccggaaaaagct
tgtatagaagtgatttggaagcctaaaacagggcagattggaaaatctgagaaggagttt
gagatgatactgaagagaacattgcaaaatatctgccttttaactgttcatccgaacacc
acaacatcaattatagttcaggttgtccacgatgatggttctcttctcccgtgtgctata
catgcagcatgtgctgctcttgtagatgccggaatccctttgaaatatcttgctgtcgcc
atatgttgttgtcttacagaaagtgggcagattatattggaccccagcaagctagaggaa
cagagaatgaagggatttgtatgtatagctttcccaagctcaattcagtctgtaatttct
caaggatcagcagatgtgggtggagaatcagtgggcaatggggttatcacatctcttaca
catggtgtaatgccagtggacgattactttcagtgtgtagaacaagggcgtgcagcaatt
ataccgctgtctaatatccttaaaaagagattgcaatcacaaccagcaagtaagcaatcc
aaggctggttga
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