Sesamum indicum (sesame): 105164974
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Entry
105164974 CDS
T04135
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03013
Nucleocytoplasmic transport
sind03015
mRNA surveillance pathway
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105164974
09122 Translation
03013 Nucleocytoplasmic transport
105164974
03015 mRNA surveillance pathway
105164974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105164974
03041 Spliceosome [BR:
sind03041
]
105164974
03009 Ribosome biogenesis [BR:
sind03009
]
105164974
03012 Translation factors [BR:
sind03012
]
105164974
Enzymes [BR:
sind01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105164974
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105164974
mRNA cycle factors
Stress granule specific factors
105164974
Spliceosome [BR:
sind03041
]
Complex C
Other components
EJC/TREX
105164974
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
90S particles
Helicases
105164974
Translation factors [BR:
sind03012
]
Eukaryotic type
Initiation factors
eIF-4
105164974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
105164974
NCBI-ProteinID:
XP_020549962
UniProt:
A0A8M8UTS8
LinkDB
All DBs
Position
LG6:complement(18699883..18704588)
Genome browser
AA seq
408 aa
AA seq
DB search
MAAAGFQRGGGARRAMEEDDAKLVFETSKGVEPITSFDEMGIKDDLLRGIYNYGFEKPSA
IQQRAVLPIISGRDVIAQAQSGTGKTSMIALAVCQIVDTKSSEVQALILSPTRELAAQTE
KVILAIGDYINVQAHACIGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRSIKL
LVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEILEMTSKFMTDPVRILVKR
DELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTAKMRENNFT
VSSMHGDMPQKERDAIMGEFRSGQTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIH
RIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggggtttcagagaggaggaggtgctcggcgagctatggaggaggacgac
gccaagctcgtctttgagacttccaaaggcgtggagccaatcacgagcttcgacgagatg
ggaataaaggacgatctccttagagggatttacaactacggtttcgagaagccttctgcc
attcagcagcgtgctgttcttccgattatctccggacgtgatgtcatcgctcaggcgcag
tctggtaccgggaagacttccatgattgcactcgctgtttgtcaaattgtcgacaccaag
tcttcagaagtccaagccttgatattgtcacctacaagggagttggctgcccagacagag
aaagtaatattggcaattggtgactatataaatgtacaagctcatgcttgcataggtggc
aaaagcgtgggcgaggatataagaaaactggagcatggagttcatgtggtatcaggcact
cctggaagagtttgtgacatgatcaagaggagaactttacgaactagatcaatcaaatta
ttagttctggatgaatctgatgaaatgttgagcagagggttcaaggaccagatttatgat
gtttacagatatcttcctccagaacttcaggttgtcttaatctccgctaccctcccaaat
gaaatattggagatgactagcaaattcatgactgatccggttcgtatccttgtaaagcgt
gatgaattgaccctcgagggcatcaagcaattctttgtcgctgtagagagagaagaatgg
aaatttgatactctgtgtgatctatatgatacccttacaattacccaggccgttatcttt
tgtaacacaaagcggaaggtggattggcttacagcaaagatgcgtgagaataactttact
gtctcgtctatgcatggagatatgccgcaaaaggagcgtgatgcaattatgggagagttt
cgatctggccagacgcgggttcttatcacaacagatgtgtgggctaggggattggatgtt
cagcaggtatccctggtgattaattatgatcttcctaacaatcgagaactttacattcat
cgcatcggacgatctggtcgttttgggagaaagggtgtcgcaataaattttgtcaaaagt
gatgacatcaaaatccttagagatattgagcagtactacagtacgcagattgatgaaatg
ccaatgaacgtggccgatctgatttag
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