Sesamum indicum (sesame): 105165223
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Entry
105165223 CDS
T04135
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105165223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105165223
03032 DNA replication proteins [BR:
sind03032
]
105165223
Spliceosome [BR:
sind03041
]
Complex A
U1 snRNP components
Sm proteins
105165223
U2 snRNP components
105165223
Complex B
U1 snRNP components
105165223
U4/U6.U5 tri-snRNP components
105165223
Complex C
U2 snRNP components
105165223
DNA replication proteins [BR:
sind03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
105165223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Microp_apicomplexa_17
Motif
Other DBs
NCBI-GeneID:
105165223
NCBI-ProteinID:
XP_011082468
UniProt:
A0A6I9TF24
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All DBs
Position
LG6:20313684..20316914
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AA seq
108 aa
AA seq
DB search
MSRPMEEDAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGHVRAFDRHCNMV
LENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggccaatggaagaggatgcccccgggaagaatgaggaagaggaattcaacaca
ggtccactttctgttttgatgatgagtgttaagaataacacacaggtgctcatcaactgc
cgcaacaacaaaaagcttctgggtcatgtgagggcttttgaccgccactgcaacatggtg
ctagaaaatgtgcgggagatgtggactgaggtgcccaagactggtaaaggcaaaaagaaa
gctcttccagttaacaaggatcgttttattagtaagatgttcctccgtggagactctgtg
atcattgtccttagaaatcctaagtga
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