Sesamum indicum (sesame): 105165245
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Entry
105165245 CDS
T04135
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105165245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105165245
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105165245
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_NXF1-5
LRR_8
Motif
Other DBs
NCBI-GeneID:
105165245
NCBI-ProteinID:
XP_011082496
UniProt:
A0A6I9THQ6
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Position
LG6:complement(20499682..20503435)
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AA seq
581 aa
AA seq
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MAYSFPEEVLEHVFSFLSSDRDRNAVSLVCKSWYEIERWCRRRVFIGNCYAVSPDIVIRR
FPEVRALEMKGKPHFADFNLVPEGWGAYVHPWIRAMSAAYPLLEEIKLKRMVVTDESLEL
IARSFKNFKVLVLSSCEGFTTDGLASIAANCRNLRELDLRESEVEDLSGHWLSHFPDNCT
SLVSLNMSCLGSEVSFSALERLVARCPNLRTLRLNRAVPIEKLPNLLHRAPQLVELGTGA
YSAEIRSDIFSNLAEAFSVCKQLKGLSGFWDVVPAFLPAMYSVCSGITSLNLSYATIQSP
DLVKLVSQCRNLQRLWVLDYIEDTGLEALAASCKDLQELRVFPSDPFGAEPNVALTEQGL
VSVSEGCPKLQSVLYFCRQMSNAALVTIARNRPEMIRFRLCIIEPQAPDYLTLEPLDAGF
GAIVENCKELRRLSMSGLLTDKVFEYIGNHAKKLEMLSIAFAGDSDLGLHHVLSGCESLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLGQKMPRLNVEVIDERGPP
DSRPESCPVEKLYVYRTVAGRRADMPGFVWTMDGDKSLTFS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattctttcccggaggaggttctggaacacgtcttttcgttcttgagctccgac
agagaccggaacgcggtttctctggtgtgcaaatcctggtacgagatcgagcggtggtgt
cgacgccgtgtttttatcggaaactgctacgccgtctcgccggacatcgtgatccggcgg
tttccggaggtgagggcgctggagatgaaggggaagccgcattttgctgatttcaacctc
gtgccggagggttggggagcatatgtgcacccgtggatcagggcgatgtctgcggcttat
ccgttgctcgaggagatcaagctcaagcgcatggtggttacggatgagagcctagagctg
atcgcgagatcgtttaagaatttcaaagttttggtgctctcgtcttgcgaggggtttact
acggatggtctcgcgtcgattgctgctaattgcaggaatcttagagaactagacttgagg
gagagtgaagtggaggacctaagtgggcactggcttagccattttcctgacaactgcacc
tcactggtatcacttaacatgtcttgcttaggctcagaggtgagtttctctgccttggag
cgcctggttgcgcggtgccctaatctgaggactcttcggctgaatcgtgctgtacccatt
gagaagctccctaacctactccaccgtgccccccagttggttgaattaggtactggtgcc
tattcagctgagattcggtctgatatcttctcaaacttggcagaagcattttcagtctgt
aagcaactcaagggcttgtcgggattttgggatgttgttccagctttccttcctgccatg
tattcagtctgctctgggatcacttcactgaacttaagttatgcaacaattcaaagtcct
gatcttgtcaagctagttagccagtgtcgaaatttgcagcgcttatgggttctggactac
attgaggacactggtctggaagcccttgctgcgtcttgcaaggatctgcaagaactccgt
gtgttcccttcagatccttttggagcagaacctaatgtggctttgacagaacaaggcctt
gtttctgtctctgaaggctgccccaaactccagtctgttctatacttctgccgtcagatg
tcaaatgccgctctagttactattgcgaggaatcggccagagatgatccgttttcggctg
tgtattattgagcctcaagctcctgattacttgacacttgaaccacttgatgctggtttt
ggagccattgtggagaactgcaaggaactaagacgcctttccatgtctggcctcctcaca
gataaagtttttgaatatattggcaaccatgctaagaaattggagatgctttctatagct
ttcgcgggggatagtgacttgggcctccatcatgtgttatctgggtgtgaaagcctgcgg
aaactggagatcagggactgtccatttggggacaaggctctcttggccaatgctgcaaag
ctggagacaatgcgatccctttggatgtcatcgtgctcagtaagttttggagcatgtaag
ctgcttggtcagaagatgcccaggctcaatgttgaagttattgacgagagaggaccccct
gattcaaggcctgaaagctgccctgttgagaaactctatgtttaccgaacagttgcggga
agaagggctgacatgcctggttttgtttggacgatggatggagataaatcgttgacgttt
tcttaa
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