KEGG   Sesamum indicum (sesame): 105165366
Entry
105165366         CDS       T04135                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105165366
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sind03021]
    105165366
Enzymes [BR:sind01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     105165366
Transcription machinery [BR:sind03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     105165366
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 105165366
NCBI-ProteinID: XP_011082677
UniProt: A0A6I9TNK3
LinkDB
Position
LG1:1171586..1180160
AA seq 1207 aa
MGARDFLEEAGPSSFNEKFSNGSFRMDIDDDMDFDCSDSDDELDSSLQDLDEGFLKSFCK
KASTAFFDQYGLISHQINSYNDFVRNGIQKVFDSIGEILIEPGYDPSKKGDGDWRRASLK
FGKVTLEKPKFWTGEKFSSVDGAKEYLNLLPRHARLQNMTYSSRIKVETHLEVFTESLSR
SDKFKTGVEKFIEKTLLHEYHTDVNFGRLPVMVKSDLCWMSELEERDCEFEQGGYFVIKG
AEKTFIAQEQICLKRLWVAKSPAWTISYRPVSKRKRIFVKLVPKVEHITGGEKILTVYFY
VTEIPIWLLFFALGVPNDREVVKMIDLDVEDSAISNILIASIYDADRKYEGFRKGGNAQK
FIKELMQGCRFPPTESVEECITNYLFPHLKSPEQKACFLAYMVKCLLEAYRGRRKVDNRD
DLRNKRLELAGELLERELKVHIKHAERRMVKAIQRDLYNDREVQSIDHYLDASIITNGLS
RAFSTGAWSHPYKRMERISGIVATIRRTNPLQATADMRKTRQQVSYTGRVGDARYPHPSH
WGKICFLSTPDGENCGLVKNLASMGLVSTDILNRESLLQKFYECGMEMLVDDASALLNGK
HKIFLDGDWVGICKDSSSFVARVRRKRRKTEVPHQIEIKRDKHHGEVRIFADAGRILRPL
LIVQNLRKIKDLKGDFSFQSLLDSSIIELIGPEEEEDCQTAWGVRYLFTAELENPPIKYT
HCELDSSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNSSIRVDTNSHQLYY
PQRPLFRTMLSDCLGRSKYDHHKGMLPRPEFFNGQCAIVAVNVHLGYNQEDSLVMNRASL
ERGMFRSEHVRSYKAEVENSEAAGKKAKTDDLVSFGKMQSKIGRVDSLDDDGFPYIGANL
QTGDIVIGKHAASGVDHSIKLKHTEKGMVQKVVLSANDEGKNFAVVSLRQVRSPCLGDKF
SSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALAKGIALGGG
LKYATPFTSPSVEDITAQLHRLGFSRWGDERVYDGRTGEKVQSLIFMGPTFYQRLTHMAE
DKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQM
HICRKCKNMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSMGISL
KFDTELC
NT seq 3624 nt   +upstreamnt  +downstreamnt
atgggtgctcgggattttcttgaagaagctggacctagtagctttaatgagaaattttct
aatggttccttcagaatggatattgacgatgacatggactttgattgttctgattcggac
gatgagcttgacagctccctccaagatttggacgagggttttctaaagagtttctgcaag
aaagcctcaactgcgttttttgaccaatatggattaattagtcatcaaattaattcatac
aatgatttcgttagaaacggaattcaaaaagtgttcgattctattggggagatcctaatc
gagcctggatatgatccatcaaagaagggggatggtgattggaggcgcgcatctctgaag
tttgggaaggtcacccttgagaaaccaaaattttggactggtgaaaagttttcatctgtt
gacggtgctaaggagtatttgaatcttttaccccgtcatgctcgtcttcagaacatgact
tactcatctaggatcaaagttgagactcatcttgaggtgttcaccgaaagtctctccaga
agtgacaagttcaaaactggtgtggaaaaatttattgagaagacattactgcatgagtat
catactgatgttaactttgggagactcccagttatggtgaagtcggatttatgttggatg
agtgaacttgaagaaagggattgtgaattcgaacaaggaggatatttcgtgattaagggg
gctgagaagacattcattgcacaggagcaaatatgccttaagagactgtgggtggccaaa
agtcctgcttggaccatttcatatcggccagtttctaaacgaaaaagaattttcgtaaag
ctagttccaaaagtagagcacataacaggaggagaaaagattctcacggtctatttttac
gttacagaaattcctatttggcttttgttctttgctttgggtgttccaaatgacagagag
gtggtaaagatgattgatcttgatgtagaagattcagccatctctaacatacttattgca
tcaatttatgatgctgacaggaagtatgagggtttccgtaagggaggaaatgcacaaaaa
tttatcaaggaactcatgcagggttgtagattcccacctacagagtcagtggaagaatgt
atcacaaactacctctttccccatctcaaaagcccagagcagaaggcttgttttcttgct
tatatggtcaaatgtctcttggaagcttatagagggcgccgcaaagttgataacagagat
gatcttaggaacaagaggttggagttggccggtgagctacttgagcgcgagctaaaagtt
catatcaaacatgcagagaggcgaatggttaaagctatacagagagacctttataatgac
cgagaggtgcagtctattgaccattacttggatgcctcaatcatcacaaatggtctttca
agagctttctcaactggggcttggtcgcacccttacaagaggatggaaagaatttctggt
atagtggctactattaggcgaactaatccactgcaggcaacagctgatatgaggaaaact
cgccagcaagtctcatacacgggcagggttggtgacgctagatacccacacccatctcat
tggggtaagatttgcttcctctcgacgccggacggagaaaattgtggactggttaagaat
ctggccagcatgggtcttgttagtactgatatcttgaatcgggaatctcttcttcaaaaa
ttttatgaatgtggaatggaaatgttggttgatgatgcttcagctctgctcaatgggaag
cataaaatttttcttgatggagattgggttggaatctgtaaagattcctcatcgtttgtt
gcaagggttagacgcaaacgccgcaagacggaagtgccacatcagattgaaattaaaaga
gacaagcatcatggagaagttcgtattttcgctgatgctggaagaatactccgtcctctc
ttaattgttcaaaatttgaggaaaatcaaagatttgaaaggagatttttcatttcagtca
cttctggatagtagcataatagagttaataggtcctgaagaggaagaagattgccaaact
gcatggggagtaagataccttttcacagctgaattagagaatccaccaatcaaatacaca
cactgtgaacttgatagttcttttttattaggactaagttgtggaatcatcccctttgca
aatcatgatcatgcaaggagagttctgtatcagtctgagaagcactctcagcaggctatt
gggttctcaaccacaaattcaagcattagagtagatacaaactctcatcaattgtactac
ccccagcggccactttttagaaccatgctttcagattgccttgggagatcaaaatatgat
caccataagggcatgctgccacgacctgagtttttcaatggccagtgtgctatcgtggct
gtcaatgtccatctcggctacaaccaagaagactccttggtaatgaatcgtgcttccttg
gagcgtggtatgtttcgctctgaacacgtccggagttacaaagctgaggttgaaaattca
gaagcagctgggaaaaaggcgaagactgatgacttggttagctttggaaagatgcaaagc
aagattggacgtgttgatagccttgacgatgatggctttccatacattggtgcgaatctc
caaactggtgacatagtcattggaaagcatgctgcatccggggtcgatcatagcatcaag
ctcaagcacactgagaagggcatggttcagaaggttgtcctttccgctaatgatgagggg
aagaactttgctgttgtatcattgagacaggttcgttctccatgtcttggggacaagttt
tctagcatgcatgggcagaagggtgtgctggggttcctggagtcccaggaaaacttccct
ttcactaaacaaggaatagttcctgacattgtgataaaccctcatgcatttccttctagg
caaacgcccggtcagctcttggaggctgcgttggccaaagggattgcactcgggggcggt
ctaaaatatgccaccccgtttacctccccatcagttgaagatataacagcgcagcttcac
aggcttggattttcgagatggggggatgagagagtttacgatgggcgaactggtgaaaag
gtccagtcccttatctttatgggaccgacattctaccagcggctcacacatatggccgaa
gacaaagtgaaattcaggaataccgggccagttcaccctcttactcgtcagcctgtggcc
gacaggaaacgtttcggtggaatcaagtttggcgagatggagcgagattgcctcatagct
cacggtgcagcagccaacctacacgaacgtctcttcacccttagtgattcatcccaaatg
catatatgcaggaaatgcaagaacatggccaatgtaatccagcgaccggtgtttggtggt
cggaagatacgtgggccttattgccgtttctgtgagtctgtggaagatgtggtgagggtg
aacgtgccttacggggctaagttactgtgtcaggagctattcagcatggggatatctctc
aagtttgatactgagctatgttga

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