Sesamum indicum (sesame): 105165874
Help
Entry
105165874 CDS
T04135
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sind03000
]
105165874
04121 Ubiquitin system [BR:
sind04121
]
105165874
Transcription factors [BR:
sind03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
105165874
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
105165874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
105165874
NCBI-ProteinID:
XP_011083338
UniProt:
A0A6I9TQA1
LinkDB
All DBs
Position
LG1:complement(13285709..13289878)
Genome browser
AA seq
1120 aa
AA seq
DB search
MNFSGQNQRRESNNRRPRSNNSLRNNRCEWVPRGSAPAPAPAPAVAAVVPSASVNGLSQN
ESQNGGEPATRPARPGTPSSNRTHHGSRGNPGRYISQREKGKEEKGKYNHQKNAEVLKSI
NIPQLVQEIQDKLLKGSVECMICYDMVRRSAPIWSCSSCYSIFHLTCIKKWARAPTSTDL
LAEKNQGCNWRCPGCQSVQLMSAKEIRYVCFCGKRPDPPSDLYLTPHSCGEPCGKPLERE
LPGSGMVKEDMCPHVCVLQCHPGPCPPCKAFAPPRRCPCGKEVITTRCSDRKSVLTCGRK
CDKLLGCGRHHCERICHVGPCDPCQVLLNASCFCKKKVEVVLCGDMIVKGEVKGEDGVFS
CSLTCEKKLNCGNHVCHETCHPGPCGECELLPSKIKTCCCGKTSLNEDRRSCLDPIPTCS
QICGKILPCGLHRCQDTCHSGVCPPCHVLVNQKCRCGSTSRTAECYKTVTENEKFTCDKP
CGRKKSCGRHRCSERCCPLSNSSTASLVDWDPHLCSMPCEKKLRCGQHSCISLCHSGHCP
PCLETIFTDLTCACGRTSIPPPLPCGTPPPSCQYPCSVSQPCGHLSSHSCHFGDCPPCSV
PVAKECVGGHVVLRNIPCGSKDIRCNKLCGKTRQCGLHACSRTCHPPPCDSSATSSTSAK
ASCRQTCGAPRRDCRHTCTALCHPSTSCPDVRCEFPVTITCSCGRVTATVPCDAGGSSGG
YTVDTVLEASITQKLPVSLQPAEGNGQRVPLGQRKLMCDDECAKMERKKVLADAFGINPP
NLDALHFGENASVSEVLSDLLRRDPKWVLSVEERCKYLVLGRGRGGINALKVHVFCAMAK
DKRDAVRLIAERWKLSVNAAGWEPKRFVVVHVTPKSKAPARMLGVKSCNPGNMLQPPVFD
PLVDMDPRLVVALFDLPRDADVSALVLRFGGECELVWLNDKNALAVFSDPARAATAMRRL
DQGSVYYGAVSVPQNGGASAMASGAGAWGSAAVSKDVATAAALKGNPWKKVVLQDSGWNE
SSWGAEEWSPNAADTKSRARTEEEDPIAASRNRWSVLQPGGTSGSSDVSVKIENLQKQPE
NPSTSGSKVDESNLNLPVQREGVEDDVSGDVVDDWENAYD
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgaacttttctggacaaaaccaacgaagggaaagtaacaatcgacggcctagaagcaac
aattctttgcggaataaccggtgtgagtgggttccgcgaggctctgcccctgcccctgcc
cctgcccctgccgttgccgcggtagttccatcagctagtgttaatggtttgagccagaat
gagagtcaaaatggtggagagccggccactaggccggctcggcctggtactccaagttcc
aataggacccatcacggatcaagaggaaacccaggtcgttatattagtcagagagagaag
gggaaggaggagaaggggaagtataatcatcagaagaatgcagaggtattgaagagcatc
aacattcctcaacttgtgcaggaaatccaggacaaactcttgaagggatcggttgaatgc
atgatttgttatgacatggttagaagatctgcacccatttggtcttgctccagctgttat
tcaatttttcacctgacttgtataaagaaatgggctagagctcccacttctaccgatttg
ttggctgagaagaatcaaggttgtaattggcgttgccctggatgtcaatctgtgcagctg
atgtcagccaaggagattcgatatgtctgcttttgtgggaagagaccggaccctccttca
gatttatatttgactccacattcttgtggagagccatgtgggaaaccattggaaagggaa
cttcctggtagtggcatggttaaagaggatatgtgtcctcatgtttgtgttttacaatgc
catccaggcccttgccccccctgcaaggcctttgctcctccacgtagatgcccatgtgga
aaggaagttattactacaagatgctctgatcggaagtctgttctgacttgtgggcgtaag
tgtgataagcttcttggttgtgggcgtcatcattgtgaaaggatctgccatgtgggccct
tgtgatccttgccaggttcttcttaatgcttcttgtttttgcaagaaaaaggttgaggtt
gtactgtgtggagatatgattgtgaagggagaagtcaagggggaagatggtgtgttctca
tgcagtttgacttgtgagaagaaacttaactgtggtaatcatgtttgtcatgaaacttgc
catccaggcccatgtggagagtgtgagttgttgccaagcaagatcaagacatgctgctgt
ggtaagacaagcttaaatgaggatagacggagttgtttggatcctatcccaacttgttcg
cagatctgtggcaagatcctcccatgtgggttgcatcgctgtcaagatacatgccattct
ggggtttgtccgccatgccatgtgcttgtcaaccaaaagtgtcgttgtggatcaacatct
cggactgcagagtgctataaaactgttacagagaatgagaaatttacttgcgacaaacct
tgtggccggaagaaaagctgcggaaggcacaggtgcagtgagcggtgctgccctctctct
aattcctcaactgcttccctggttgattgggatccacatctctgctcaatgccatgtgag
aagaagctaaggtgtggacagcattcctgtatatcactctgtcacagtggtcattgtcct
ccatgcctggagacaatttttactgatttgacttgtgcttgcggtagaacttccattcct
cctccgctgccctgtggtacacctccaccttcatgtcagtatccttgctcggtaagtcag
ccatgcggtcatctgtcttcacatagctgtcattttggagattgtccaccatgctcagtt
cctgttgcgaaagagtgcgtcggtggacatgtagtcctccggaacataccttgtggatcg
aaggatattagatgtaataaattatgtggaaagacaaggcagtgtggtctacatgcatgc
tctagaacttgtcatccaccaccatgtgattcttctgctacatcaagtaccagtgcgaag
gcatcttgcaggcagacatgtggtgctccaagaagagattgcaggcatacgtgtactgcc
ctttgtcacccttccacgtcatgccccgatgtaagatgtgagttccctgtcacgatcact
tgttcttgtggccgagtaactgcaactgttccttgtgatgctgggggtagcagtggtgga
tatactgttgataccgttcttgaagcttctataacccaaaagttaccagtatctctacaa
cctgctgaaggaaacggccagagagttccgcttggtcagagaaagctcatgtgtgatgat
gaatgtgcaaaaatggagcggaagaaagttcttgctgatgcttttggcattaatccccca
aacttggatgcacttcactttggtgagaatgcatcagtgtctgaagtgctttcagatctt
ctcaggcgtgacccaaagtgggtgttgtctgtggaagagagatgcaaatatctggtcctt
ggcaggggcagaggggggataaatgcacttaaagttcatgtattctgtgcaatggcaaaa
gacaagagagatgcagtgcggctgatagcagaaaggtggaagctttctgtgaatgcagct
ggctgggagccgaagagattcgttgttgttcatgttactcccaagtccaaagccccagct
cgtatgcttggtgttaaatcttgcaatcctggtaacatgttacagccaccagtatttgat
cccctggtggacatggatccccgtcttgttgttgctttatttgatttacctagggatgca
gatgttagtgcattggttctgaggtttggtggggaatgtgaattagtctggttgaatgac
aagaatgcattagctgtcttcagtgatccagcacgagccgcaactgctatgaggagattg
gatcaggggtctgtgtattatggtgctgtctccgttcctcaaaatggtggtgcttcggct
atggcttcaggtgctggtgcatggggatctgctgcagtgtcaaaagacgtagctacagca
gcggcactcaagggtaacccttggaagaaggtggtacttcaggactctggttggaatgag
agttcgtggggtgctgaggaatggtcacctaatgctgctgataccaagtcacgtgctagg
acagaagaggaagatccaattgcagcatcaagaaacaggtggagcgtgctgcaaccagga
ggcacctccggatcatctgatgtttctgttaaaatcgagaatcttcagaaacagccagaa
aatccttcaacgtcgggttccaaggtagatgaatccaatctgaatttgccagtgcagagg
gaaggtgtggaggacgacgtgtctggtgatgtagtggatgattgggagaatgcctatgat
tag
DBGET
integrated database retrieval system
