Sesamum indicum (sesame): 105165992
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Entry
105165992 CDS
T04135
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105165992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sind04131
]
105165992
Membrane trafficking [BR:
sind04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
105165992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
105165992
NCBI-ProteinID:
XP_011083462
UniProt:
A0A6I9TEI8
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Position
LG7:2591718..2602513
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AA seq
791 aa
AA seq
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MMISNGIEDEEKWLAEGIAGIQHNAFYLHRAVDSNNLREALKYSAQLLSELRTSKLSPHK
YYELYMRAFDELRRLEMFFKDEDRHGCSIVDLYELVQHAGNVLPRLYLLCTVGSVYIKSK
EAPAKDVLKDLVEMCRAVQNPIRGLFLRSYLAQVSRDKLPDIGSEYEGEGDTVMDAVEFV
LQNFTEMNKLWVRMQHQGPVREKEKLEKERSELRDLVGKNLHVLSQIEGVDLEIYRDAVL
PRVLEQIVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPTVDLKTVLSQLM
ERLSNYAASSPELLPEFLQVEAFSKLSNAIGKVIEAQVDMPIVGAITLYVSLLSFTLRVH
PDRLDYVDQVLGACVKILSGKAKLEDSKATKQVVALLSAPLDKYDDIVTALTLSNYPRVM
DHLDAGTNKIMAMVIIRSIMKNKTFVSTSDKVEVLFELIKGLIKDLEGISTDDLDEEDFN
EEQNSVACLMHILYNDDPEEMLKIICTVWKHIMAGGPKRLPFTVPPLVFSALKLVRRLQG
QDGDVAGEEVPATPRKIFQLLNQIIESLSVVPAPELALRLYLQCAEGANDCDLEPVAYDF
FTQAFVLYEEEIADSKAQVTAIHLIIGTLQRMNVFGVENRDTLTHKATGYSAKLLKKPDQ
CRAVYACSHLFWVDDQDGIKDGERVLLCLKRSLRIANAAQQMANVTRGSSGPVTLFVEIL
NKYLYYFEKGNPQITASVIQGLIDLIKTEMQSDSATGGPASDAFFTSTLRYIQFQKQKGG
AMGEKYEPIKL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgatgatatcaaacggaatcgaagatgaggagaaatggctagcagaaggcatcgccggg
attcaacataacgccttctacttgcatcgcgctgtggactcgaataatctccgagaagcg
ctcaaatactccgcgcaattgctgtccgagctacgaacttcgaaactctcgcctcacaaa
tattatgagctctatatgcgtgcgtttgatgaactaaggaggttggaaatgtttttcaag
gatgaagatcggcatggttgttcaattgttgacctatatgaacttgttcagcatgctgga
aacgtcttgcctagattgtatcttctgtgcacagttggatctgtctatataaagtcaaag
gaggctcctgctaaggatgttctcaaagatcttgtcgaaatgtgtcgagctgtccagaac
cccatacgtgggctgtttttgaggagttatcttgctcaagttagtcgagataagttacca
gatattggttcagagtatgaaggtgaaggcgacactgtcatggatgctgtagaatttgtg
ctgcagaatttcacagagatgaataaactatgggtccggatgcagcaccagggacctgtc
agggagaaagagaaactcgaaaaagaacggagcgaactgcgtgatcttgtgggaaaaaat
ttacatgtcctcagtcagattgagggtgttgaccttgaaatatacagagatgctgttctt
cctagagtcttggagcagattgtcaattgtaaggatgaacttgcgcaatattatttgatg
gactgcataattcaggtctttccagatgagtaccacttgcagacccttgagacattattg
ggtgcttgccctcaacttcaacctacagttgacctgaaaacagtgttgtcgcaactcatg
gagaggttgtctaactatgctgcttcaagtccagaattgttaccagaatttttacaagtt
gaagcattttccaagctgagcaatgcaattggaaaggttattgaagcacaagttgatatg
cctattgtcggagcaattactttatatgtgtctcttctgtctttcactctccgcgttcat
cctgatcggctggattatgtggatcaagtgctgggagcatgtgtcaaaatattatctggg
aaagcaaagctggaagatagtaaagccacaaaacaagttgttgctcttctgagtgcccca
ctagataaatacgatgatattgtcacagctcttacactttctaattatccccgcgtaatg
gatcaccttgatgctggaactaacaaaatcatggcaatggttatcatccggagcattatg
aaaaacaaaacttttgtttcaacttctgacaaggttgaggtactgtttgaactgataaaa
ggcctcataaaggatctggaagggatttctacagatgatcttgatgaagaggatttcaat
gaggagcaaaattctgttgcttgccttatgcacattttgtataatgatgacccagaggag
atgctaaagataatatgtactgtgtggaaacatataatggctggaggtccaaaacgccta
cctttcacagttcctcctcttgtcttttcggcactcaagttggttaggagattgcaaggc
caagatggagatgtagctggagaagaagttccagccaccccaaggaaaatatttcagctc
ctgaatcagattatcgagtctctttcagttgttccagcacctgaacttgcgttgaggctg
tacttacaatgtgcagagggtgctaatgattgtgatcttgaaccggtggcttacgatttt
tttacacaagcttttgtgctctatgaggaagaaattgcggattctaaagcccaggtgaca
gcaatacacctaataattgggactctgcagagaatgaatgtgtttggtgttgagaataga
gatacattgacccataaagccacggggtattcagctaaacttttaaagaagccagatcag
tgcagagcagtttatgcgtgttcacatcttttctgggttgatgatcaggatggcatcaaa
gatggagaaagggttctactctgcttaaaacgttcattaaggattgccaatgctgctcag
cagatggcaaatgttaccaggggtagcagtggacctgtaacgctctttgttgagatactt
aacaagtacctttattacttcgagaagggaaatcctcagataacagcttctgtaattcag
ggcctcatagatttaattaaaactgagatgcagagtgacagtgcaactggcggtcctgct
tcagatgcattcttcacaagcaccttgcgttatattcaattccagaagcaaaagggaggc
gctatgggtgagaaatatgagcctattaagttgtga
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