Sesamum indicum (sesame): 105166266
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Entry
105166266 CDS
T04135
Name
(RefSeq) THO complex subunit 5B isoform X1
KO
K13174
THO complex subunit 5
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105166266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105166266
03041 Spliceosome [BR:
sind03041
]
105166266
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105166266
Spliceosome [BR:
sind03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105166266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
105166266
NCBI-ProteinID:
XP_011083872
UniProt:
A0A6I9TFE9
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Position
LG7:complement(4920442..4926243)
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AA seq
810 aa
AA seq
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MEVTMAEPGEILPERNVDMAALYDMLRSSKASAEEIVAKMLAIKKESQPKSQLRELVTRI
LLNFVTLRQANRSILLEEDRVKADTERAKAPVDLTTLQLHNLMYEKNHYVKAIKACKDFK
TKYPDIELVPEEEFLRDAPEDIKSSTLSTDSAHDLMLKRLNYELFQRKELCKLRDKLELQ
RKALEETIANRKKFLSSLPSHLKALKKASLPVQHQLGLLHTKKLKQQQLAELLPPPLYII
YSQLLAQKEAFGENIELEIAGSVKDAQAFARQLANKDSAILTNLENSKLEDDVPDEEDDG
QRRRKRPKKVLSKDNHDQSGIYQSHPLKVSLHISDDEASDLNSAKLISLKFEFLIKLNVV
CVGVEGSEEDPQNNILCNLFPDDTGLELPLQSAKLWIGNSFSFDDRRTSRPYKWVQHLAG
IDVLPEVSPLISVSGDSNSETTRHGSVLSGLSLYRQQNRVQTVVQRICARKKAQLALVEL
LDSLRKLTWPTFTCESVPWASYTPHCNLHGWLSMTSAGNSTTSLPLVDAEQSQGPTSVNA
DRNSGRSKEMETTTEDGELPSLVPVANGVNDVGLTPTKGSELENSRRLSLISKSIMSPIN
KGKSPSFKKLEEDVDLMLESDNELDEPVKVEETSDNASPLGELAFVDNSWADCGVQEYSL
VLTRRLDNDDRIMKLEAKIKISTEYPLRPPHFGLSLYSSSQGENYFVSNGSRWYNELRAM
EAEVNVHIIRMIPFDQENLILGHQVLCLAMLFDFFVDDGNPSEKRRSTSVIDVGLCKPVS
GRLVSRSFRGRDRRKMISWKDNTCTPGYPY
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgacgatggcggagcccggtgaaatactgccggagcgcaatgtagacatggcg
gcgctctacgacatgctgcggtcgagcaaggcttcggcggaagaaatcgtggccaagatg
ttggccatcaagaaagaatctcagcccaaatcccagctccgggaacttgtcactaggatt
ctcctcaatttcgtcaccctacgtcaggcaaataggtctatcttgcttgaagaagacaga
gtaaaagcagatactgaacgcgctaaagcacctgtggacctcacaaccttgcagctccat
aatttgatgtatgagaaaaatcactatgttaaagcaataaaagcttgcaaagactttaag
actaaatatcctgatattgaacttgtacccgaggaagaattcctcagagatgccccagaa
gacattaaaagctccacattatcaactgacagtgcgcatgatttgatgcttaaaaggctc
aactatgagcttttccagcgcaaagaattatgcaagcttcgtgataagttggaactacaa
agaaaagctctcgaagagacaattgctaacaggaaaaagttcttatcaagtctcccttca
cacctcaaagctctcaaaaaggcatccttgcctgtgcaacatcagttggggcttctgcat
accaagaaactaaagcagcagcaattagcagagttgctcccacctcctctctacataatc
tactctcagttacttgctcagaaggaagcgtttggagagaatattgaactggagattgca
ggaagtgtaaaggatgcacaggcttttgcgcgccagcttgcaaataaggactctgctata
ttaacaaacttagagaattccaagttggaagatgatgtgcctgatgaggaagacgatggt
caaaggaggagaaagcggccaaagaaggttctaagcaaggataaccatgaccagtctgga
atatatcaaagtcatcctcttaaagtttccctccacataagtgatgatgaagcttcggac
ttgaactcagcaaaactcatctccttgaagtttgagttcttaataaagttgaatgttgtg
tgtgtaggagtagaaggctctgaagaagatcctcaaaacaatatcttgtgcaacttattt
cctgatgacactggccttgagctccctctgcagtcagcaaagctctggattggcaattct
ttttcatttgatgataggcgaacttcacggccttacaaatgggtccagcatttggcagga
attgatgtcttgccagaggtttcgccactgatttcagtctctggagactctaatagtgag
actactagacacggttctgttctgtcaggtctgtcattatatcgtcagcagaacagagtg
cagacagttgtgcaaaggatttgtgctcgtaaaaaggctcagctggctcttgtggagtta
cttgattcgctaaggaagcttacttggcctacttttacctgtgaaagcgttccatgggct
tcatacactccacactgcaatttgcatggctggctatccatgacttcagctggtaacagt
actacatctctgccactggttgatgcagaacagagtcagggtcctacaagtgtcaatgca
gatagaaactctggtaggtccaaggagatggagaccacaacagaagatggggagcttcca
tctttggttccagttgctaatggtgtaaatgatgttggactcacccccacaaaaggatct
gaacttgagaattccagaaggctgagtttgatttcaaaaagtatcatgtccccaatcaac
aaggggaagtcaccaagttttaagaagcttgaggaggatgttgatctcatgctggaatct
gataatgagcttgatgaaccagttaaagtggaggaaacatctgataatgcatcaccattg
ggagaactagcatttgttgacaattcatgggcggactgtggggttcaagaatacagtctt
gtactaactcgtaggttggacaatgatgacaggattatgaaattggaagccaagatcaaa
ataagcacagaatatcctcttaggcctcctcattttggactgagtctttatagttcctca
caaggagagaactacttcgtgtctaatggttcgaggtggtacaatgaacttcgtgcaatg
gaggcagaggtcaatgttcacataataaggatgataccgttcgatcaagaaaatttaatt
ctaggtcatcaagtgctttgccttgcgatgctgtttgacttcttcgtggatgatgggaat
ccttctgagaagcgaaggtctacttcagtgattgatgttggtttatgcaagcctgtaagt
ggaaggcttgtcagccgatcttttagaggtcgggatcgtaggaaaatgatttcatggaaa
gacaacacctgcactcctggttatccttactag
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integrated database retrieval system
