KEGG   Sesamum indicum (sesame): 105166269
Entry
105166269         CDS       T04135                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
sind  Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:sind00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sind03009]
    105166269
Ribosome biogenesis [BR:sind03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    105166269
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 NBCH_WD40 EIF3I Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IP5PC_F Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_VPS8 WDR54 WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_LRRK2 DUF5984 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 105166269
NCBI-ProteinID: XP_011083877
UniProt: A0A6I9TFF2
LinkDB
Position
LG7:complement(4948251..4955690)
AA seq 452 aa
METEVVIASSPTDAGISCWDLHTGAEHLRYKSCASPSHGLTSVAGRFLASSQIRESKSSS
SSGSILYWSWSKPQVEVRSFPAEPIKPLVSNSQGTYIAGGGVSGDIYFWEVATGKLLKKW
HAHYRAVSCLVFNDDESLLISGAEDGSVRVWSLFLIFDDARREEMKHLFEYSFHEHSLRV
TDVKTGYGGSNAIIVSASEDRTCKVWSLSKGKIVRNVVFPSMIDAISLDPGEHVFYAGGR
DGKIYIAGLNSPVTSNSNYGLHIVGALSEHSKGVSCLASSADGFLLVSGSEDGMIRVWDT
RTRNIIRVFRHTKGPVNNVLVIRQPKYINPRTSATSLASAARRQGLTLPPPLEKFANSPD
ESPYVKVLIGPQTLPNQPLFSPYISIQTMEAQIKELQKQGSSAAAEVDVERLKSEQLRSV
QMIQQWKKMYENLHQFCVSELLEGSHTESPNG
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggaaaccgaagtagttattgcctcatctccgacagacgctggaatcagctgttgggac
ctccacaccggggctgagcacctccgctacaagtcgtgcgcctccccttcccacggtctt
acctccgttgccggccgctttcttgcctcctcccaaatccgagagtccaagtcgtcgtct
tcgtctgggtccattctctattggtcctggagcaagccccaggttgaagttaggagcttt
cctgccgaacccataaagccacttgtctccaatagtcaaggaacttacattgcaggagga
ggtgtttcaggggatatatacttttgggaggttgcaactggcaaattgctcaagaagtgg
catgcacattaccgggctgttagttgcttggtttttaatgatgacgaatcccttttgatt
tcaggggcggaagatggatctgttcgcgtttggtcacttttcctgatattcgatgatgca
aggagggaagagatgaaacatttgtttgagtacagtttccatgagcattctttgagggtg
actgatgttaaaactggctatggtggatcgaatgcaataattgtgtctgcttctgaggat
cgtacatgcaaggtttggagtttatctaaagggaagatagtaagaaatgttgtcttccct
tcaatgatagatgcaatttccttggaccctggggaacatgtcttttatgcgggtggtaga
gatggtaaaatctatatagctggattaaattctccagtaacttccaacagcaactatgga
ttgcatatagttggtgcactgtctgagcacagcaaaggtgtatcctgcttggcttctagt
gctgatggatttttattagtttctggatcagaggatggcatgattagagtgtgggacact
agaacgcgaaacattattcgggtctttagacacaccaaaggtccagttaataatgttctt
gtcatcagacagccgaaatacataaatcctcgtacatctgctacttctctggcttcagca
gcaaggaggcaaggtctgacattaccacctccactggaaaagtttgctaattccccagat
gagagtccatatgttaaagtactcatcggtcctcagaccctgccaaatcaacccttattc
tctccatacataagcattcagacaatggaagctcaaataaaagaactacagaaacaaggt
tcttctgcagctgctgaagtggatgtggaaaggttgaaaagtgaacagctgaggtctgtg
caaatgatccagcaatggaaaaagatgtatgagaatctgcatcaattctgtgtcagcgag
cttctggaaggcagtcacactgaaagtcccaatggataa

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