Sesamum indicum (sesame): 105166286
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Entry
105166286 CDS
T04135
Name
(RefSeq) LOW QUALITY PROTEIN: coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sind04131
]
105166286
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sind04147
]
105166286
Membrane trafficking [BR:
sind04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
105166286
Exosome [BR:
sind04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105166286
Exosomal proteins of bladder cancer cells
105166286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
TPR_COPA_B
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD40_RFWD3
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Fis1_TPR_C
ENTH
Motif
Other DBs
NCBI-GeneID:
105166286
NCBI-ProteinID:
XP_020551078
UniProt:
A0A8M8UVZ6
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Position
LG7:complement(3512314..3518346)
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AA seq
1210 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE
VDTLRGHMNNVSCVLFHARQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFSVSGDALFYVKDRFLRSFEYSTQKDTQLIPIRRPG
SSGLNQGPRTLSYSPTENAILVCSDTDGGSYELYVIPKDSYGRGDIVQEAKRGIGSSAVF
VARNRFAVLEKTSNQVLVRNLKNEIVKKSSLPIGTDAIFYAGTGNLLCRSDDRVVNFDLQ
QRIVLGDLQTSFVRYVVWSPDMESVALLSKHSIVIADKKLVHRCTLHETIRVKSGAWDGN
GVFIYTTLTHIKYCLPNGDSGIIKTLDVPVYITKIYGSTIFCLDRDGKNRPIIIDSTEYI
FKLSLIRKRYDQVMSMIKNSELCGQAMIAYLQQKGFPQVALYFVKDERTRFNLALESGNI
EKALESAKKIDEKDYWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFHYLITGNLDKLSK
MMKIAEVKNDVMGQFHDALYLGDVRERVKILENAGHLPLAYITASVHGLHDIAEHLAKEL
GDNVPSLPGGKQASLLVPPSPVLCAGDWPLLMVSKGIFEGGLDDTGRGVDEDYEEEAADA
DWGEALDIVEVANLQNGDVSLVLDDEAVHDENDEEGGWDLEDLDLPPDAETPKTAPNARS
SIFVTPTPGMPVSQIWVQKSSLAAEHAAAGDFDTAMRLLSRQLGIKNFSPLKSQFIDIHM
GSHTYLRAFTSAPVISIAVERGWSDSATPNVRRPPALVFNFSQLEEKLKAGYKATTAGKF
SEALRHFLSILHTIPLIVVETRREVDEVKELVVIVKEYVLGLQMELKRRXXXXXXXTHCN
LQIPHLRLALLNAMTVCFKAQNLSTAANFARRLLETNPSNENQARTARQVLQAAERNMRD
ATQLNYDFRNPFVVCGATYVPIYRGQKDVTCPYCHTHFVPSQQGQLCTVCDLSVIGADAS
GLLCSPSQMR
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagtttgagacgaagagtaatagagtaaaaggtttgagtttccacagcaag
aggccatggatcttggcgagtttacacagcggcgtgatccagctctgggattaccgcatg
gggacgctcattgatcggtttgacgagcatgatggacccgttcgcggcgttcatttccat
aaatcgcagccgctttttgtatctggaggtgatgattataaaatcaaggtgtggaattac
aaattgcaccggtgtctatttactcttcttggtcatcttgattacatcaggacagttcaa
tttcatcatgagtatccctggattgtaagtgcaagtgatgaccaaacaattagaatatgg
aactggcaatctcggacttgcatttctgtgttgactgggcacaaccactatgtcatgtgt
gcttcatttcacccgaaagaagaccttgttgtttcagcctctttggatcagactgtgcgt
gtttgggatattggtgccttgaggaagaaaacagtatctcctgctgatgacattctgaga
ttgtcccaaatgaataccgacttctttggtggggttgatgctgttgtgaagtatgtcttg
gaaggccatgaccgaggggttaactgggcttctttccatccgactctcccactgatcgtt
tctggagcagatgaccgtcaagttaaaatctggcggatgaatgatacaaaggcttgggag
gtggacacattgagaggacacatgaataatgtgtcatgtgttctcttccatgcaaggcag
gacatcatagtgtcaaattcagaagacaagagtatcagagtttgggatgctacaaaaaga
actggcctgcagacttttcgtagggagcatgacagattctggattcttgctgcccatccg
gagatgaatcttcttgctgctggtcatgacagtggcatgattgtttttaagctagagaga
gaacgtcctgcgttctctgttagtggtgatgcactcttctatgtcaaggacaggtttcta
cgttctttcgagtattcgactcagaaagatactcagctgatacctatccgtcgtcctggt
tcgagtggtttgaatcaagggcctcgaactctttcttatagtcctacagaaaatgctatc
ttggtgtgctcagacacagatgggggatcatatgaactctatgttattcccaaagatagc
tatggcagaggtgacatagttcaagaggcaaaaagaggtattgggagttcagcagttttt
gtggctcgaaataggtttgctgtcctcgagaagacctccaaccaagtccttgtcaggaat
ctgaaaaatgaaatagtaaagaagagttctttacccattggtactgatgctatattctat
gcgggcaccggaaatttgctatgcaggtctgacgacagggttgtcaattttgatcttcaa
caaaggattgttcttggggatctccaaacatcttttgtcagatatgtggtttggtctccg
gatatggagagtgttgctttactgagcaaacattcaattgtgattgctgacaagaagctc
gtgcaccgttgcactcttcatgagactattcgtgtcaagagtggagcatgggatggtaat
ggtgtctttatttatactactctgacgcacatcaagtactgccttcctaatggggatagt
ggaattatcaagacactggatgtccctgtatacattacgaagatatatgggagcacaatc
ttttgcttggaccgagatgggaaaaaccgtcctatcattattgattctactgagtatatt
tttaagctatccctgataagaaagagatatgatcaggttatgagcatgataaaaaattca
gaattatgcggacaagccatgattgcttatttgcagcagaagggcttcccacaagttgct
ctttattttgtgaaggatgagagaactcgtttcaacttggcccttgaaagtggtaacatt
gagaaagcacttgaatctgctaaaaagattgatgagaaagattactggtataggctaggt
gtggaggccctgcggcaggggaatgctgggattgttgaatatgcataccagaagacaaag
aacttcgagaggctatctttccattatctgataactggtaatctggacaaattgtccaaa
atgatgaaaattgctgaagtcaagaatgatgtcatgggtcaatttcatgatgcactgtat
ctgggtgatgtccgggaacgggttaagattctggagaatgctggtcatttgcctcttgca
tatatcacagcctcggtccatgggctccatgatattgcagagcatcttgctaaggaattg
ggggataatgttccttctctgccaggggggaagcaagcttctctcttggtacccccgagc
ccagtgttatgtgctggagattggcctttgttgatggtgagtaaaggcatatttgagggt
ggccttgatgatacaggcagaggtgtcgatgaagattatgaagaagaggcagcggatgct
gattggggtgaggcgttggatattgttgaggtggccaacttgcagaatggtgatgttagt
ttggtgctggatgatgaggctgtgcacgacgagaatgatgaggaaggaggatgggatctt
gaggatctggatctgcctcctgatgctgagacgccaaagactgctcctaatgcgcggtct
tccatctttgttacccccacccctggcatgcctgtaagccagatttgggtccagaaatcg
tccctagctgcagaacatgctgctgccggggactttgacacggcaatgcgcttattgagc
cggcagttgggaataaagaatttctccccgttgaagtctcaatttattgatattcacatg
ggcagtcacacttacttgcgtgccttcacctcagcaccagtaatctcaattgcagtggag
aggggttggagtgactcagcaacccctaatgtccgaagaccccctgcacttgtcttcaat
ttctctcaattggaagagaaactcaaggctggttacaaggctacgactgctggaaagttt
tctgaagctcttcgccatttcctgtctattcttcacacaattccactgattgtggtcgag
acacgaagagaggtggatgaagtcaaggagttggttgttatagtaaaagaatatgttctg
ggtttgcagatggaactcaagaggaggnngannnnnnnnnnnnnnntcacccattgtaac
ctccagattccacacttgagactcgccttgttgaatgctatgactgtttgcttcaaggca
caaaatctaagcactgcagccaactttgcccgtcgacttctggagaccaatccaagcaat
gagaaccaagccaggacagctcgccaagttctacaggctgccgaaaggaacatgagagat
gctactcagctgaactatgacttcagaaatccctttgtggtctgtggggccacatacgtt
cccatttatcgggggcagaaagatgtaacttgcccttactgccacacgcatttcgtccca
tctcagcaaggacagctctgtaccgtttgtgacctttcagtcataggagctgacgcatct
ggcttgctctgttctccttcacagatgagatga
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integrated database retrieval system
