Sesamum indicum (sesame): 105166612
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Entry
105166612 CDS
T04135
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105166612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sind03009
]
105166612
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
105166612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
TIP49
AAA_16
AAA_22
AAA_2
AAA_14
RNA_helicase
AAA_28
IstB_IS21
AAA_17
AAA_33
nSTAND3
Nucleolin_bd
NPHP3_N
Bac_DnaA
AAA_18
Rad17
Viral_helicase1
AAA_3
Mg_chelatase
ATPase_2
Parvo_NS1
Cytidylate_kin2
NACHT
ABC_tran
TsaE
NB-ARC
AAA_19
AAA_11
TTC3_9th
DUF7602
Motif
Other DBs
NCBI-GeneID:
105166612
NCBI-ProteinID:
XP_011084336
UniProt:
A0A6I9TSS4
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All DBs
Position
LG7:8262937..8269566
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AA seq
814 aa
AA seq
DB search
MVRRRGGGGGAKPRSNYDRILRRHIESAAKKNHGTVEQLVDHLRSTYPHYARHKLQPFTK
RVHQVIQVSSRRNDDMDDSNDDGDTPLMKKRRKIDEKEEKLRLIEARHLRNRNDDVLNSS
VGGSSSSVASVSSSEGDDSSDEEVSTSDDTIYGEKFEPEFDLMKSMLRENLRRRSKETGK
GKEVKEVLELEVVDNKDMKKVNLVTEEGKLGDDLSMINKNNNSGKEGHEANGPMFKDLGG
MSGVIEELKMEVIVPLYHPQIPRHLGVKPMAGILLHGPPGCGKTKLAHAIANETGVPFYK
ISATELVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIVTQL
MTCMDESHRLVKPNDDNADSESSNCRPGYVLVIGATNRPDAVDPALRRPGRFDREIVLGV
PDECARVQILSVLTCNLKVEGAFDLVKIARSTPGFVGADLASLANKAGNLAMKRIIDKRK
VELSKESEDRGSSEDWWRQPWSHEEMEKLSITMADFEEAAKMVQPSSRREGFSTIPNVKW
DDVGGLHLLREEFDRYIVRRIKFPEDYEDFGVDLETGFLLYGPPGCGKTLIAKAVANEAG
ANFIHIKGPELLNKYVGESELAVRTIFSRARTCSPCILFFDEVDALTTKRGKEGGWVVER
LLNQLLIELDGAEQRRGVYVIGATNRPEVMDRAVLRPGRFGKLLYVPLPSPDERGMILKA
LARKKPIDANMDLMALGRDSACENLSGADLSALMNEAAMAALEEKLTSLYRSLDGVPWTI
KDVHFRRALEKISPSVSDKQIQYYKLLSESFKAA
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggtaaggagacgcggcggcggcggcggagcaaaacctaggtccaattacgacaggatt
ctccgccggcacatcgagtccgccgcgaagaagaaccacggaaccgtcgagcaattggtg
gaccacctccgctccacctacccacactatgcccggcacaagctgcagccattcactaaa
cgtgttcaccaagtaattcaggtatcaagcagaagaaacgacgacatggatgattctaac
gatgatggtgatactcctcttatgaagaaacgaaggaaaatcgacgagaaggaggaaaaa
ttgcggctcattgaagctcgacacttgaggaataggaatgacgatgttttgaatagtagc
gtaggcggctcatcatcctctgtggcatctgttagttcttcggaaggagatgattcgtcc
gatgaggaggtgtctacgtcggacgacaccatctacggggagaaattcgagccggagttt
gacttgatgaagtcgatgctacgggaaaatttgcgtaggagatcgaaggagacggggaag
gggaaagaggttaaagaagtcttggaattggaggttgtggataacaaggatatgaagaag
gttaacttggtgactgaagaaggtaaattaggtgatgatctgagtatgattaataagaat
aataatagtggcaaggaggggcatgaagctaatgggccaatgtttaaggatttaggggga
atgagtggtgtgattgaggaattgaaaatggaggtcattgtgccattgtatcacccgcag
ataccacgtcacttgggggtgaagcctatggcagggattctattacatgggccaccagga
tgtggaaaaaccaagttggctcatgccattgccaatgagactggagtgccattttacaaa
atttctgctacggaactggtgtctggagtttcaggtgcatcagaagaaaatattcgagag
ttattctcaaaagcatacaggacagcaccatctattgttttcattgatgaaattgatgca
attgcctcaaaaagggaaaatttgcagagggaaatggagaggcgcattgtgacacagttg
atgacatgcatggatgaatcacacaggcttgtgaaacccaacgacgacaatgcagattct
gaaagttctaattgcagacctggctatgtacttgttattggcgcaacaaatagacctgat
gctgttgaccctgccttgaggaggcctggacgatttgatcgtgaaattgttttaggagtt
cctgatgagtgtgcacgtgttcagattctctcagtgctaacatgcaatcttaaggttgaa
ggtgcttttgatcttgtgaaaatagctaggtccactccagggtttgttggagcagatttg
gcatcactagccaacaaggctggtaaccttgcaatgaagagaatcatagacaagagaaag
gttgaactttcaaaagaatcagaagacaggggttctagtgaagattggtggaggcaacca
tggtcccatgaagaaatggagaaactcagcataaccatggccgattttgaggaagctgct
aaaatggttcaaccttcgtctagaagagaaggattttctactataccaaatgtgaaatgg
gatgatgttggaggtcttcatttgcttagggaggagtttgaccgttatatagttaggcgt
ataaagtttccggaagattatgaggactttggggtggacttggagacaggatttttgctt
tatggtcctccaggctgcggaaagacattgattgccaaggctgttgctaatgaagctggg
gcaaatttcatacatattaagggtcctgagcttcttaataaatatgttggtgaaagtgag
ttggcagtgcggacaatattcagtcgtgcaaggacatgttctccatgtatacttttcttt
gatgaggtggatgcactaacgacgaagcgtggtaaagaagggggctgggttgttgagcgg
ctcttgaaccagctattgatagaactggatggtgcagaacagagacggggtgtttatgta
attggtgctacaaataggcctgaagttatggatcgtgctgtgctccgaccaggaagattt
gggaagcttctgtatgttcctctccctagtccagatgaacgagggatgatcttgaaagct
cttgctcggaagaagccaatagatgctaatatggacttgatggcccttgggagagacagc
gcttgtgaaaatctcagtggcgctgatctctctgctctgatgaacgaagccgccatggct
gctcttgaagagaaactaacatcattgtacagaagtttggatggcgtaccgtggaccatc
aaagatgtacatttcagacgagctttggagaaaatctctccttctgtttcagacaagcaa
atacaatattacaagcttttatcagaaagcttcaaagctgcatga
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