Sesamum indicum (sesame): 105166668
Help
Entry
105166668 CDS
T04135
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105166668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105166668
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
105166668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
105166668
NCBI-ProteinID:
XP_011084411
UniProt:
A0A6I9TH78
LinkDB
All DBs
Position
LG7:8570498..8573373
Genome browser
AA seq
200 aa
AA seq
DB search
MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPSLQPDWQIGECVAIWW
RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFQFNMIHP
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgtcgccggtggtgaatacgtatcctctgtcgagctacactttcggcaccaaa
gagccgaagatggagaaagatacctccgtcgccgatcgccttgcccgtatgaaagtcaac
tacatgaaggaaggcatgaggactagcgtcgagggtattttattggtacaagagcataat
catccccatattcttcttttgcaaattggaaatactttctgtaaacttcctggtggtaga
ttaaagccaggagagaatgaaattgaaggcttgaaaagaaaactctctagcaaacttgct
gcaaattcgccttccctgcagccagattggcagattggtgagtgtgtagcaatctggtgg
agaccaaactttgaaacaatcatgtatccttattgcccgccacacataacaaagcctaag
gagtgcaagaaacttttccttgttcacctgtctgaaagagagtattttgctgtgcccaag
aacttgaaactccttgctgttccattgtttgaactatatgacaatgttcagagatatgga
cctgttatatctaccatcccgcagcagttatctcggtttcagttcaacatgatccatcca
tag
DBGET
integrated database retrieval system
