Sesamum indicum (sesame): 105166729
Help
Entry
105166729 CDS
T04135
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105166729
Transcription machinery [BR:
sind03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
105166729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Motif
Other DBs
NCBI-GeneID:
105166729
NCBI-ProteinID:
XP_011084487
UniProt:
A0A6I9TGK2
LinkDB
All DBs
Position
LG7:8982847..8986942
Genome browser
AA seq
518 aa
AA seq
DB search
MGVVTVSSSAARTPLGLDARYLTRVSLCRRQVILSFKNDKNKNIALIAPRESVALPLEAK
KEKEKRSRKVKKLVERVSAVSTDEASPSTIDLDYNEAAAKLEYIYKRSPATTVSLEEVKD
QRVKRRRPLRKRTGEAEEAEKKTADDVVRSKRKKERRLTLEKRIALKTNKEVDFLASSSQ
KRKQRKNDEDEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQ
VKENLQNDLGREVTDDELAEATKTNAVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ
DFSNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYSLFWIRHAIIRSMTLSSFTKVSF
GLESVRVEIQKAKLELLFELQRLPSDEEIVNRVGISPERYHEVMRVSKPISSLHARHAVT
QEEFINGISDVDDVEGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE
IAGNLNISREMVRKHEVKALMKLKHPARIDYLRRYIYK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtctctagctctgctgcacgaactccactgggattggacgcaaga
tatttgactcgtgtatctttatgtagaaggcaagtaatattatcattcaagaacgataaa
aacaagaatatagctttaattgcacctagagaatctgtagctctacctttggaggcaaaa
aaagaaaaggagaagaggtcaagaaaggtaaaaaaacttgtagaaagagtaagtgcagtc
tcaacagatgaagcctctccaagtaccatagatttggattacaatgaagccgctgcaaaa
ctggaatatatatacaaacgaagtcctgcaaccactgtctctcttgaggaggtcaaagac
caaagggtaaagagaaggcgaccactaaggaaaaggactggagaggctgaggaggcagag
aagaaaactgctgacgatgtggtaaggagtaaaaggaagaaggagagaaggttgactctt
gagaagagaattgctctcaaaacgaacaaagaagtcgattttcttgcatcatcatcccag
aaaaggaaacaaagaaagaatgatgaagatgagaagattgataggcttgtacgggactat
tcagcttccactgacttggtcagcctagactggaagaaaatgaagatcccaccagttctt
ccttcatctgagcatgcctggctgtttaagctgatgcaacctatgaaggcaatcctccaa
gtgaaggagaatttacaaaatgatctaggaagagaagtgacagatgatgaattagcagag
gcaacgaaaactaatgctgtccagctgaggaaacaattggaagttggtcgggccgccaga
aacaagttgatcaagcacaacctccggttggttttgtttgtaatgaacaagtatttccaa
gacttctcaaatggccccagattccaagacctgtgtcaagctggtgtcaaaggtcttata
actgccattgatcgctttgagccaaaaaggaagttccggctctcaacatatagcctattt
tggattaggcatgctattattcgttctatgacgctgtcaagcttcacaaaggtctcattt
ggccttgagtcggtccgagtagaaatccagaaggccaagctagagttgttgtttgagctc
cagcgattgccatctgatgaagaaattgtaaatcgagtgggaatctcccctgaaagatac
catgaagtcatgagggtatcaaagcctatctcttctctccatgcaaggcatgcagtaaca
caggaagagttcatcaatgggatttctgatgtggatgacgttgaaggagataaaagaagg
caacctgcacttctcaggcttgctcttgatgatgtgctcgattcgctgaagcccaaggaa
agtttggttatcagacaaagatatggacttgatggtaaaggagacagaacactaggagaa
atcgcaggaaatttgaatatttcgcgagaaatggtaaggaagcatgaagtaaaggctctc
atgaagctcaagcatcccgctcgaatagattaccttcgccgctacatttacaaatga
DBGET
integrated database retrieval system
