Sesamum indicum (sesame): 105166957
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Entry
105166957 CDS
T04135
Name
(RefSeq) autophagy-related protein 18c
KO
K22991
WD repeat-containing protein 45
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sind04131
]
105166957
Membrane trafficking [BR:
sind04131
]
Autophagy
Other autophagy associated proteins
Others
105166957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
ANAPC4_WD40
BCAS3_WD40
Beta-prop_IFT140_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
WDR55
Beta-prop_RSE1_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
105166957
NCBI-ProteinID:
XP_011084784
UniProt:
A0A6I9TKI7
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Position
LG7:complement(10245475..10249116)
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AA seq
417 aa
AA seq
DB search
MTVHLDSMTSAVSTSRGIFPPSGFGVYEPMGRASGPHLQPQPEIGDNDETELYSVSWNQD
YGCFAAGTSRGFRIYSCDPFKETFRRDLRSGGFKIVEMLFRCNILALVGSKANTHYPPNK
VIIWDDHQSRCIGEFSFRSEVRAVKLRRDRVVVVLEHKIYVYNFMDLKLLHQIETVANPR
GLCCLSHHLNTSVLACPGLRRGQVRVEHFGLNMTKIINAHDSKIACMTLTMDGLLLATAS
MRGTLIRIFNTMDGTRLQEVRRGADKADIYSIALSPNVQWLAVSSDKGTVHIFSLRVRVV
GEDRTADSSATKSPALLYQISSNALDPLISPSTGANPGSSFSFMKGVLPKYFSSEWSFAQ
FHLPECTQFIAAFGSHNSVIILGMDGSFYRSSFDPAKGGLMVQQEYIRFLKTETRPK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgactgttcatttggactccatgacttccgctgtatcgacgtctagagggatatttcca
ccttctggatttggtgtttatgagccgatgggtagggcttctggccctcatctccaacca
cagcctgagattggagacaatgatgaaactgagttatattctgtgtcttggaatcaggat
tatggttgctttgctgctggcacaagccgtggatttcgtatatatagttgtgatcctttc
aaggaaacattcaggcgtgatctcagaagtgggggatttaagattgttgagatgctgttt
aggtgcaatatattagctcttgttggtagtaaagccaatacccattaccctccaaataaa
gttattatctgggatgatcatcaaagcaggtgcataggcgagttctcatttagatctgag
gttcgtgcagttaagctaagacgggaccgtgttgttgttgttctagagcacaagatatat
gtttataattttatggacctgaagcttcttcatcaaatagagactgtagcaaatcccagg
ggactttgttgtttgtcacaccacctgaatacgtccgtgttggcctgcccaggcctgcga
cgaggacaagttcgggttgaacattttggcttgaatatgacaaaaataatcaatgctcat
gattctaagattgcttgcatgaccttgacaatggatgggctgcttcttgcaactgccagt
atgagaggcactctgataagaattttcaacacaatggacggaactcgattacaagaggta
cgcagaggggcagataaagctgatatatacagtatagcactgtctccgaatgttcagtgg
ttagctgtgtccagtgacaaaggtacagtccacattttcagtctccgagtgcgggtggtt
ggtgaagacaggacagctgattcctctgctactaaaagtccagcattgctttatcagatt
tcttcaaacgcccttgatcctctaatttctccaagcactggtgctaatcctggttcttca
ttctcattcatgaaaggggttttaccaaaatatttcagctcagaatggtcatttgcgcag
tttcacttgccagaatgtacacagtttattgcagcatttggttctcataactctgtaatt
attttaggcatggatgggagtttctacaggtccagctttgatccagcgaagggtgggttg
atggtgcagcaggagtatatccgctttctaaaaactgaaacaagacccaaatag
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