Sesamum indicum (sesame): 105167139
Help
Entry
105167139 CDS
T04135
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sind04131
]
105167139
04121 Ubiquitin system [BR:
sind04121
]
105167139
Enzymes [BR:
sind01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105167139
Membrane trafficking [BR:
sind04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
105167139
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105167139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-RING-like
Zf-C2H2_ZNF451_6th
Rad50_zn_hook
DUF7129
Motif
Other DBs
NCBI-GeneID:
105167139
NCBI-ProteinID:
XP_011085033
UniProt:
A0A6I9TIN1
LinkDB
All DBs
Position
LG7:complement(11387851..11390591)
Genome browser
AA seq
395 aa
AA seq
DB search
MVMISMPSTYWCYRCSRFVRVGTQDSINCPDCNGGFVEEIETPSRSSLSESRRRRFPAAA
MYMVRTPESGPGSGSSSSPRLRRSRRNGGDRSPFNPVIVLRGHNDGGAGAGAGGGAAPGG
GFELYYDDGAGSGLRPLPASMSEFLLGSGFDRLLDQLAQIEANGIGRIDNNPPASKAAIE
SMPTVEISDQHIAIESYCAVCKEAFDLGSQAREMPCKHLYHQDCILPWLSLRNSCPVCRH
ELPTDNENVNGNRDASEVNRGTNEVGNDDETVGLTIWRLPGGGFAVGRFSGGRRGGERES
PVVYTEMDGGFTNNGVPRRISWGSRGSVSRERGGLRRILHSLFACFGRGESSTSSSSSDS
RISRRSGSLSSVFSSASRRRRGWGFEVNDGGDQRW
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgatctcgatgccttcaacctactggtgttacagatgcagccgatttgtcagg
gtcggaacccaagattccatcaattgtccagattgcaacggtgggttcgtcgaggagatc
gaaaccccctctcgatcttcgctctctgagtcccgaagacgtcgtttccccgcagccgcc
atgtacatggtgcgaactcctgaatcgggccctggttccgggtcgtcttcaagccccagg
ctgagaagaagtcgcaggaatggtggcgatcgctcaccctttaatccggttattgttctt
cgtgggcacaacgatggaggagctggagctggagctggaggcggtgccgctcctggaggt
ggctttgaattgtattacgatgacggagccgggtcgggtttaaggccgttgcctgcgagc
atgtcagagtttttacttgggtcggggttcgacaggttgctagatcagttggctcaaatt
gaggcaaatgggattggaagaatagataataatccgcctgcatccaaggctgctattgag
tctatgcccactgtcgagattagtgaccaacacatagctattgaatcgtactgtgctgtc
tgtaaagaggcctttgatttggggagccaggctcgggaaatgccctgcaagcatttgtac
catcaagattgtattttgccctggctttcgttgagaaactcgtgtccagtttgtagacat
gaattgccaactgataatgagaatgttaatggtaatcgtgatgcaagtgaagtgaataga
ggaacgaacgaggttggaaatgatgatgagacggttggactgacaatttggagactgccc
ggtggtgggttcgctgtggggaggttttctggagggagaagaggtggagagagagagtcg
cctgttgtgtacacagagatggacggtggatttactaataatggggtgccaaggaggatt
tcatggggttctagagggagcgtatctagggagaggggtggattgagaaggattttgcat
agtttgtttgcatgttttggtagaggtgaatcttccacttctagttctagctcggactct
agaataagccggaggagtggctcattgtcatcagtttttagctccgcatcaagacggcgg
agaggatggggttttgaagttaacgatggaggcgaccagagatggtag
DBGET
integrated database retrieval system
