Sesamum indicum (sesame): 105167158
Help
Entry
105167158 CDS
T04135
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Module
sind_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105167158
Enzymes [BR:
sind01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
105167158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
DUF7460
NosD
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
105167158
NCBI-ProteinID:
XP_011085051
UniProt:
A0A6I9THR6
LinkDB
All DBs
Position
LG7:11479928..11481689
Genome browser
AA seq
393 aa
AA seq
DB search
MVSRKMILILIFTFFYIITSSFASNPSYNVKSFGANSDANSDSTKAFLSAWSAACATTQP
AAIYIPPGRYLLRNALFNGKTCKNKAITIRIDGTLVAPSDYNAIGNSGTWLKFQKVAGLS
ISGGTLDGQGTKLWACKNSSKSCPKGAASLAFYSSNNISIDSLSSLNSQMFHILIYNCHN
ANLNNVKISAPVNSPNTDGIHLQQSSGVTITNSRVGTGDDCVSIGPGTSNLWIENLSCGP
GHGISIGSLGWELQEAGVENVTVKTATFTGTENGVRVKTWARPSNGFVKHVLFQHIVIVN
AQNPIIIDQQYCPHHNYCPTQGSGVKISDITYQDVRGTSATEVAVKFDCSKSNPCTGITL
DKVNLTCRDKPAIASCAYAGGTASGDVEPNSCF
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggttagcagaaaaatgatactaattcttatcttcaccttcttctacatcatcacctca
tcatttgcatccaatcccagctacaatgtgaagagtttcggagcaaattccgacgcaaac
tccgactccacaaaggcttttctcagtgcatggtccgcagcctgcgccaccacgcaaccg
gcagcgatctacattccaccgggtcgttatttgttacgcaacgcactcttcaatggcaaa
acgtgcaaaaataaggccattactattcgcattgatggcactttggtggctccctctgat
tacaatgctattgggaacagtggtacctggttgaagttccaaaaggtcgccggactttcc
atctccgggggaaccctagacgggcaaggaacgaaattgtgggcttgcaagaactccagc
aagagttgccccaaaggagctgcgtccctggcattctacagttcaaacaacatatccatc
gactcattgtcctccttaaacagccaaatgtttcacattctcatctacaattgccacaat
gccaatctcaataacgtcaaaatctctgcccctgtcaatagccctaacaccgacggaatc
catctgcaacagtcgtcaggagtcactattaccaactctcgtgttggcactggcgacgat
tgtgtctccataggccccgggacctccaacttgtggatcgaaaacctctcttgtggccct
ggtcacgggataagtataggtagtctaggttgggagttgcaagaggcaggagttgagaac
gtgaccgttaaaacggcaactttcaccggaacagaaaacggtgtgagagtgaagacctgg
gcaagaccaagcaacggatttgttaaacatgtcctcttccaacatattgtcatcgttaat
gcccaaaaccctattatcatagaccaacaatactgcccccaccacaattactgtcctaca
cagggctcaggcgtgaaaattagcgatataacataccaagatgtacgcggaacatctgca
acggaggtagcggtgaaatttgactgtagcaaatcaaatccatgcactggaattacactt
gataaagtgaatctcacctgcagagataagccagctattgcatcctgtgcctatgcgggg
ggaacggcttctggtgatgttgagcccaatagttgcttctag
DBGET
integrated database retrieval system
