Sesamum indicum (sesame): 105167243
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Entry
105167243 CDS
T04135
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sind01009
]
105167243
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sind04131
]
105167243
Protein phosphatases and associated proteins [BR:
sind01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105167243
Membrane trafficking [BR:
sind04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
105167243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
COG2
Motif
Other DBs
NCBI-GeneID:
105167243
NCBI-ProteinID:
XP_011085175
UniProt:
A0A6I9TIZ3
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Position
LG8:complement(138903..152289)
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AA seq
1011 aa
AA seq
DB search
MDSPPSHSPGRSPGNSKKPSSYTSTSSLSKSIADASSQSFSSILNNPNPSSSVVGWWSSS
TAVPGPEFAPLPSAPKPGSEITRSDFIPYLSSVSESHSRFVDILRQHDRDHQVQDGSFAG
GLAGEALVACLREVPALYFKEDFQLEDGATFRAACPFRTISENVALQERLSQYLDVVELH
LVREISMRSSSFFEAQVQLEDLNAKIVQGCGRVRELKETIRLLDSDLVGSARKVQELSKK
RGDLIKLQNKLRLVLSVNQAISTLQLLVASADCLGALDITDDLQHLLDGDELIGLHCFRH
LRDHVTTSVESINSILSAEFIRASLRGAENMDVLVTTSAFTSNGRHDDVRLEEEQTSNFQ
DQLLPLIIGLLRTGKLPAVLRIYRDTLASDIKTSVKMTVLNMQLESDSISGEGIVDSDGG
GSSLGSKLKSLSPDSFLKLLEEIFKIVQTRLLRASEVKKAIEWIMGNLNGHYAAASVAAA
IAHGAAAPETANEEDGRASSFSSQSPQNATRVTSTQGRGYDTASPNLSKNFRADILRENA
EALFAACDAAHGRWAKIVGIRSQIHPKLKLQEFLSVYNISQEFISSTEKIGGRLGYSIRG
TLQSQAKSFIEFQHESRMTKMRALLDQENWAEIDVPDEFQNIVTSLCSSVSVTTGDSDAA
SDDAASSSKEVIPSTDGSSIAHAGLSNSLQTIEHSDSNGTVVDHIPNANSSRSSAATENS
NADVSTSSQGNSASTKERGKPALRMLHFRGVGYHMVNCGLYLVKMMSDYIDMSNCLPALS
AEIVHRVAEILKLFNSRTAHLVLGANALQVSGLRSITARHLAMASQVISFTYAIIPEIRR
VLLLKVPETYKGLLQSELDRVATDYKNHRDEIHSKLVQIMRERLLVHLRSLPQIVEGWNR
SEDTEQPSQFARSLTKEVGYLLRTLSKHLLEEDVQAIFGQVVVILHTQISDAFSRLEIST
PQAKSSLHCDIQHILGCIRALPSDNSSKSGPQNWGLLDEFLAQNVGSEHSE
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggattcgccgccttcccattctccgggaaggtcgcccggtaactccaagaaaccctcg
agttacacttcgacgtcctcattgtcaaaatcaatcgccgatgccagcagccagagcttc
tcctccatcctcaacaaccctaatccttcctcatccgttgtcggttggtggtcttcttcc
accgccgttccaggacccgaatttgcccctttgccctctgcgcccaaacctggatccgaa
atcacccgatccgatttcattccttacctatcctccgtctccgagtctcactctcgcttc
gtcgacattctcaggcagcacgatagggatcaccaggtgcaggacggtagttttgctgga
ggcctcgcgggggaagcattggtggcgtgcttgagggaggttcccgcgttgtattttaaa
gaggatttccaattggaagatggcgccactttcagagcagcgtgcccattcagaacgatt
tcggagaatgttgcgctgcaggagaggttgtcgcagtatttggatgtggtggagttgcat
ttagtgagggagatttcgatgcggtctagctccttctttgaagcgcaggtgcagttggag
gatttgaacgcgaagattgttcaagggtgcgggagggttagggagttgaaggagacgatc
aggcttttggactctgatttggttggttcggctaggaaagtgcaggagttgagcaagaag
cgtggggatttgatcaagttgcagaacaagctaaggctcgttctttcagtaaaccaggcc
atctccactcttcagttgcttgttgcatctgcagattgtcttggagctttggatattact
gacgacctgcagcatctattggatggagatgagctgattggtttacattgctttcgtcat
cttcgtgaccatgtaacaacttcagtagagtcaattaacagcattctttcagcagaattt
attcgtgcatctttgcgcggtgctgaaaatatggatgtattagtgacaacatctgccttc
acctccaatggaagacatgatgacgttcgactggaggaagaacaaacgtctaattttcaa
gatcagcttcttcctcttatcatcggattacttagaacaggcaaattaccagctgtgttg
agaatatatcgtgatacacttgcttctgatataaagacttctgttaagatgacagttttg
aatatgcaactggagtcagattctatctccggagaggggattgtggattctgatggtggt
ggctcatcacttggaagtaagttaaaaagtctatcacctgatagctttctgaagcttttg
gaggaaattttcaagatagtgcagacacgcttgttgcgggcttctgaagtcaaaaaagca
attgagtggatcatgggcaatctcaatggtcactatgccgctgcttcagttgctgctgcc
attgcacatggtgcagctgctcctgaaacagctaatgaggaagatggccgtgctagttcc
ttttcgtcacagtctccccaaaatgctacccgagtgacatctacccagggaagaggatat
gatactgcaagtccaaatctttcaaaaaatttcagagctgatattttaagagagaatgca
gaagctctatttgctgcttgtgatgctgctcatggaagatgggctaaaattgttggaatc
cgttctcaaattcatccaaagctgaaattgcaggaatttcttagtgtttacaacattagt
caggaatttataagttcaaccgagaagattggtggaaggttgggatacagcattcgtgga
acactacagtcgcaagctaaatccttcattgaattccagcatgaatctcgaatgacgaag
atgagggctttgcttgaccaagaaaattgggctgagatagatgtaccagatgaatttcag
aatattgtcacttcattgtgttcttcagtatcagtgactactggagatagtgatgcagct
tctgatgatgctgcatcaagttctaaagaagtgattccaagtactgatggttcctccatt
gcgcatgctggtctatcaaattcactgcagactatcgaacattctgattctaatgggaca
gttgtggatcatataccaaatgctaattcatcacgttcgagtgcggcaactgagaatagc
aatgctgatgttagtacttcctctcagggcaacagtgccagcactaaggagcgtggaaaa
cctgcccttcggatgcttcatttcagaggtgttggatatcacatggtaaactgtggctta
tatttggtgaagatgatgtcagactacatagatatgagcaattgtttgcccgcgctatct
gctgaaatagttcatcgtgtcgctgagatcttgaaattattcaattcaaggactgctcat
cttgttcttggagcgaatgctttacaggtgtctggtttgagatcgattactgctagacac
ttggctatggcaagtcaagtcataagtttcacgtatgccatcatacctgaaattaggaga
gttctcttgctcaaagtgccggagacgtataaagggctgttgcagtcagagctcgaccga
gtagcaactgattataaaaatcaccgtgatgagattcattccaagctggttcagataatg
agagaaagattattggttcatctacgtagcttgccacaaattgttgaggggtggaataga
tccgaggacactgaacagcctagtcagtttgctcggtctctcaccaaggaggttggatac
cttctgcgtacgttatctaaacacctgcttgaggaggatgttcaagcaatttttgggcaa
gtggttgtaattctgcacactcaaatttctgatgcattttcacggttagagataagcact
ccgcaagcaaaaagcagtcttcattgcgatatccagcatatacttgggtgcatcagagca
ttgccttctgataattcgagtaaatctggtccacaaaactgggggctgcttgatgaattc
ctggcacaaaatgttggctctgaacatagtgaatag
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