Sesamum indicum (sesame): 105167273
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Entry
105167273 CDS
T04135
Name
(RefSeq) DNA damage-binding protein 1 isoform X1
KO
K10610
DNA damage-binding protein 1
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03420
Nucleotide excision repair
sind04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105167273
09124 Replication and repair
03420 Nucleotide excision repair
105167273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105167273
03400 DNA repair and recombination proteins [BR:
sind03400
]
105167273
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
105167273
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
105167273
TCR (transcription coupled repair) factors
Cul4-CSA complex
105167273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Beta_propel
Motif
Other DBs
NCBI-GeneID:
105167273
NCBI-ProteinID:
XP_011085220
UniProt:
A0A6I9TPA6
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Position
LG8:complement(346851..357532)
Genome browser
AA seq
1089 aa
AA seq
DB search
MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQAMLDVPIYG
RIATLELFRPHGEPQDLLFVATERYKFCVLHWDAEAAEVITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCPRPTIVVL
YQDNKDARHVKTYEVTLKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
SASAFKAIPIRPSITRAYGRVDADGSRYLLGDHNGLLHLLVITHEREKVTGLKIELLGET
SVASSISYLDNAVVFVGSSYGDSQLIKLNLHPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSASDDPHDTFLVVS
FISETRILAMNLEDELEETEIEGFYSNVQTLFCHDAIYDQLVQVTSTSVRLVSSTSRELR
HEWFAPAGYSVNVATASATQVLLATGGGHLVYLEIGDGVLTEVKNAQLEYDISCLDINPI
GDNPNYSQLAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCSFEGISYLLCAL
GDGHLLNFVLNTSNGELTDRKKVSLGTQPIALRTFSSKNATHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSYMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH
QEQTRTFAICSLKYNQSSVEDSEMHFIRLLDDQTFEFISTYPLDQFECGCSILSCSFSDD
SNVYYCVGTAYVMPEENEPTKGRILVFAVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMLRDDGSRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL
GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYAFLEMLQTNLRKI
IKGVGGLSHEQWRSFYNEKKTVDAKNFLDGDLIESFLDLSRNRMEEISKAMNVPVDELMK
RVEELTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtatggaattatgtggtgacggctcacaagccgacaaatgttactcattcctgc
gtcggcaatttcaccggtccgcaggagctcaatctcatcattgcgaaatgcacccgaata
gagatccatttactcacccctcaaggtttacaggctatgttggatgtaccaatttatggg
agaatcgccacgctagagcttttccgcccacatggagaacctcaggatctcctcttcgta
gctacagaaagatataaattctgtgttttgcattgggatgctgaggctgctgaggtcatc
acaagggcaatgggggatgtttcagatcgaattggtcgccccacagacaatggacagatt
ggcataattgatccagattgcagattgataggacttcatctatatgatggattattcaag
gtcattccattcgataacaagggccagctcaaggaagcattcaatattaggcttgaggag
cttcaagttttggatatcaagtttttgtatggctgcccaaggccaaccattgttgtactt
taccaggataacaaggatgctcgtcatgtgaaaacatatgaggtcactttgaaggataag
gattttgttgagggcccatggtctcagaacaatcttgataacggggcagacttgttaatc
cctgtgccacctcctctttgtggtgtcctaattattggtgaagagactattgtttattgc
agtgcctcagctttcaaggcaatcccaattagaccttctatcacaagagcttatggtagg
gttgatgctgacggttctcgctacttactcggggatcataatggccttctgcacctactt
gtcataacccatgaaagagagaaagtaactggactcaaaattgaactcttgggggaaacg
tctgttgcatcgtcaatttcatatcttgataatgctgttgtttttgttggctcaagttat
ggagattcacagctcataaagcttaatcttcatccggatgcaaaaggttcttatgtagaa
gttcttgaaaggtatgtcaatttggggccaattgttgacttctgtgtggttgacttagag
aggcaaggtcaaggtcaggttgtaacttgctcaggagcctacaaagatggttctcttcgc
attgttcgcaatgggatcgggataaatgaacaggcatctgtagagcttcaaggaatcaaa
gggatgtggtcgctacgatcagctagtgatgatcctcatgatactttcttggttgtaagc
tttattagcgagacacgtattttggcgatgaatcttgaggatgaattggaggaaactgag
atagaaggtttttattcaaatgtccagacattattttgtcatgatgctatttatgatcaa
cttgtgcaggttacttcgacctcggtcagattggtgagttctacctctagagagctccgg
catgaatggtttgctccagcagggtattcagtcaatgttgccacagccagtgcaactcag
gttttgttggctactggtggtggccatcttgtctatctagaaattggtgatggagtgttg
acagaagtgaaaaatgctcaactggagtatgacatttcatgcctggacattaatccaatt
ggtgataatccaaattatagtcaactagcagcagtgggaatgtggacagatatcagtgtc
aggatattttcactgcctgacttgaatcttattacaaaggagcacttgggaggggaaata
attccacgatctgtacttttatgttcctttgaaggaatatcatacttgttatgtgctctt
ggagatggacatcttctgaattttgtgttgaatacaagtaatggtgagttgacagacagg
aaaaaagtttctctcggaacccaacctattgcactccgcaccttctcatcaaagaatgca
acccatgtttttgctgcttctgatagaccaactgtcatctacagcagtaacaagaaattg
ctttacagcaatgtaaatttaaaagaagtcagttatatgtgccccttcaactctgctgct
ttccccgacagccttgcgattgctaaagaaggtgaactaacaattggcaccatcgatgac
attcaaaagcttcacatacgctctatcccacttggagagcatgcacgacgtatatgccat
caggaacagacccggacgttcgccatatgtagcttaaagtataaccagtcaagtgtggaa
gactcagaaatgcactttatccgcctattagacgaccagacttttgagtttatatcaact
tacccacttgatcagtttgagtgtggttgctccattcttagctgctcattctctgatgac
agtaatgtctactactgtgttggaactgcatatgtaatgccagaagagaatgaacctaca
aaaggccgaatactagtttttgctgtagaagatggtaaacttcagctaattgctgagaag
gaaactaaaggggctgtttactctcttaatgccttcaatgggaaactgctcgctgcaatt
aatcagaagattcagttgtataagtggatgcttcgggatgatggctctcgtgagttgcaa
tctgaatgtggtcatcatgggcatatactcgccctttatgtacaaactagaggagatttc
attgttgtaggtgacctgatgaaatcaatatctctcctgatttacaagcatgaggagggc
gccattgaggaacgagcgcgtgactacaatgcaaattggatgtcagctgttgagattctg
gatgatgacatttaccttggtgctgagaacaattttaacctcttcactgtccgtaaaaac
agtgaaggggccacagatgaggagcgtggtcgccttgaggtggttggtgaatatcacctg
ggtgaatttgttaatcgatttcgacatggttctctcgtcatgcggttgccagattctgat
gttggccagattccgactgtaatattcggcactgtcaacggagtcattggggtcatcgct
tctctccctcatgagcagtatgccttcttggaaatgctgcagacgaatttgagaaaaatt
attaagggtgtgggaggattgagccatgagcaatggagatccttctacaacgagaagaaa
actgtagatgcgaaaaacttcttggatggagatttaattgaatcgttcctcgatcttagt
cggaatcggatggaggagatctcaaaggcaatgaatgttccagtggatgaactgatgaag
agagtagaagaactgactaggctacattaa
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