Sesamum indicum (sesame): 105167365
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Entry
105167365 CDS
T04135
Name
(RefSeq) LOW QUALITY PROTEIN: protein STABILIZED1
KO
K12855
pre-mRNA-processing factor 6
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105167365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105167365
Spliceosome [BR:
sind03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105167365
Complex C
U5 SnRNP specific factors
105167365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
PRP6_TPR
TPR_14
HAT_PRP39_N
Suf
TPR_19
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
CFAP70_TPR_C
TPR_16
TPR_2
TPR_17
TPR_8
TPR_CcmH_CycH
TPR_1
TPR_9
Y4kD_C
ARM_TT21_N
ubiquitin
PMC2NT
Motif
Other DBs
NCBI-GeneID:
105167365
NCBI-ProteinID:
XP_011085353
UniProt:
A0A6I9TJD7
LinkDB
All DBs
Position
LG8:complement(1146319..1150120)
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AA seq
1008 aa
AA seq
DB search
MVFVKSPENKTLILNLNPSITTLRWLSLHIQRNYLIPISQQRLYFSARLLSSPENEGILL
SHLGVSPNSTLTLHVPFLGGMQAPVPPKSRLDFLNTKPPPNYVAGLGRGATGFTTRSDIG
PARAAPDLPDRSAAAVGAGGAAGVGRGRGKGPGEEDEEEENEEKGYDENQKFDEFEGNDA
GLFASAEYDDEDKEADAVWEAIDKRMDSRRKDRREARLKEEIEKYRASNPKITEQFADLK
RKLYTLSTEEWDSIPEIGDYSLRNKKKRFESFVPVPDTLLEKARQEKEHVSALDPKTRAA
GGTETPWAQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVDPKGYLTDLKSMKITSD
AEVSDINKARLLLKSVTQTNPKHPHGWIAAARLEEVAGKPQVAQQLIKKGCEECPKSEDV
WLEACRLASHVDAKAVIARGVKAIPNSVKLWMQAAKLEQDDVNKSRVLRKGLEHIPDSVR
LWKAVVELANEEDARLLLQRAVECCPLHVELWLALARLETYENAKKVLNKAREKLPKEPA
IWITAAKLEEANGNTAMVGKIIERGIRALQREGVEIDREMWMKEAEAAERAGSVATCQAI
IHNTIEVGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALTVFLTKKSIWLKAAQLEK
SHGTRESLDALLRKAVTYIPHAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIW
LAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNTAEERRLLDEGLKLF
PSFFKLWLMLGQLEERLGNLEQAKEAYESGLKHCPNCIPLWLSLAQLEEKVSGLSKARAV
LTMARKKNPQNPELWLAAVRAESRHGYKKEADILMAKXMVPRPQQKTKSRDAYKRCGDDP
QVLAAVGKIFWHDRKVDKARSWFNRAVTLAPDIGDFWALYYKFELQHGTEETQKDVLNRC
VAAEPKHGEKWQAISKAVENSHQPTEFILKKVVVAIGKEEHAAENGKN
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttgtgaaatcccctgagaacaaaaccctaatcttgaatcttaatccttccata
accactctaaggtggcttagtctccatatccagcgaaattacctcatacccatttcgcaa
cagcgcctctacttctccgcccgcctcctctccagcccggagaacgaaggcatcttgctt
tctcacctcggagtttccccaaattccaccctgacattacacgtaccattcctcggcggt
atgcaagctcctgtccctccaaagagtaggttggattttctaaatacaaaaccgccaccg
aattatgtcgccgggctcggccgtggtgctacgggcttcaccacccgttcggatattggt
ccggcgcgtgccgcgcctgacttaccggatagatcagcggcggcagttggcgctggtgga
gccgctggggttggtcgtggccgtgggaagggccctggggaggaggatgaggaggaggag
aatgaggagaagggatacgatgagaatcagaagtttgatgagtttgaagggaatgatgcg
gggttgtttgcttctgcggagtatgacgatgaggataaggaggctgatgcggtgtgggag
gcaatcgataagaggatggattcgcgtaggaaagataggagggaggcgaggcttaaggag
gaaattgagaagtatcgtgcctcaaatccaaaaattacggaacagtttgccgacttaaag
aggaaattgtacacattgtcaactgaagagtgggatagtataccggagataggtgattac
tctttgaggaataagaaaaagaggtttgagagttttgtacctgttccagatacgcttttg
gaaaaagctaggcaggaaaaagagcatgtcagtgccttggatccgaagaccagggcagct
ggtgggactgaaactccgtgggcgcagacgccggttacggatttgactgccgtaggagaa
ggcagaggaactgttttgtcactgaagttagacagattatctgattctgtttctgggttg
acagtggtggatcctaagggttacttgacagatttgaagagtatgaagattactagtgat
gcagaggtatctgatatcaataaggccaggctgttgctgaaatcagtcacacagacgaat
ccaaagcatcctcatggttggatagcagccgctaggttggaggaggtggcagggaagcct
caggttgcccagcagttgatcaagaaaggatgtgaggaatgtccgaaaagtgaggatgtc
tggttggaggcatgccgtctggcatctcatgttgatgctaaggctgtgattgcaaggggt
gttaaggcaattccgaattcagtgaagttgtggatgcaagcggcgaagcttgagcaggat
gatgtgaataagagtagggtgttaaggaaagggcttgagcatattccagactcagtcagg
ctttggaaggcagttgtcgagcttgccaatgaggaagatgcaagacttttgctgcagaga
gctgttgaatgctgcccattgcatgtggaactgtggttggctctcgctaggttggaaact
tatgagaatgcgaagaaggtgttaaataaagctagggaaaagcttcctaaggagccagct
atatggatcactgctgccaagttggaagaagctaatgggaatacggccatggttgggaag
attattgaaaggggtattcgagctttacagagggaaggtgtagaaattgacagggaaatg
tggatgaaagaagctgaggcagctgaaagagctgggtccgttgcaacttgtcaggctata
attcataacactattgaggttggggtggaggaagaagataggaagaggacatgggttgct
gatgctgaggagtgtaagaagagaggttccattgagacagcaagggccatctatgctcat
gcccttactgtgttcttaacaaagaagagcatatggctaaaagcagctcagcttgaaaag
agccatggcaccagggaatctctggatgctttgctgcgtaaggcagttacttacataccg
catgctgaagttttgtggctaatgggtgccaaagaaaagtggcttgctggtgatgtgcct
gctgctagggcaattcttcaagaagcatatgctgcaatccctaattctgaggagatttgg
cttgctgcattcaagcttgagtttgagaaccatgaacctgaaagagctagaatgcttctt
gcaaaggcacgagaaaggggaggaacagagagagtttggatgaaatctgcaattgttgag
agagaactgggaaacactgcagaggagaggaggttgttggatgaagggctgaagctcttc
ccttcatttttcaaactttggctgatgcttgggcagttggaggaacgtcttggtaacttg
gaacaagccaaagaagcatatgagtcgggcttgaagcactgccccaattgtattccttta
tggctttcgcttgctcaactggaggaaaaagtaagtggcctaagtaaagctcgcgcagtt
ctgaccatggctagaaagaaaaatcctcagaatcctgaactctggcttgctgcagtgcga
gctgagtcgcgacatggttataagaaagaagccgacatattgatggcaaaanngatggtt
ccacggcctcagcaaaaaaccaaaagtagggatgcgtacaaaagatgtggggatgaccct
caagtccttgccgctgtcgggaagatattttggcatgacaggaaggttgataaagctagg
tcctggttcaacagggccgtcactcttgctccggatattggggatttctgggcattgtac
tataaatttgaactccaacacggcactgaggagacccagaaggatgtattgaacagatgt
gtcgcagcagagccaaagcacggcgagaagtggcaagccatatccaaagctgtcgagaat
tcgcaccagccaacagaattcatcttgaagaaggtggtagtagcaataggaaaagaggag
catgcagctgagaatggcaaaaactag
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