Sesamum indicum (sesame): 105167672
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Entry
105167672 CDS
T04135
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sind03000
]
105167672
03036 Chromosome and associated proteins [BR:
sind03036
]
105167672
Transcription factors [BR:
sind03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
105167672
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
105167672
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
HMG_box
Rttp106-like_middle
HMG_box_2
CDC45
HMG_WDHD1
HMG_box_5
YL1
Motif
Other DBs
NCBI-GeneID:
105167672
NCBI-ProteinID:
XP_011085773
UniProt:
A0A6I9TK77
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Position
LG8:3655182..3660381
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AA seq
639 aa
AA seq
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MTEHSFNNISLGGRGGTNSGQLKLHSGGVVWKKQGGGKAVEVDKSDLLGLTWMKVPRSNQ
LGVRTKDGLYYKFTGFRDQDVASLTTFFQSNFGKTPEEKQLSISGKNWGEVDLNGNMLTF
LVGAKQAFEISLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFVG
DESHPSAQVFRDKIVSMADVGAGGEEGVVTFDGIAILTPRGRYNIELHLSFLRLQGQAND
FKIQYSSVVRVFWLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDSVIDTTLSIKE
DLYNAKYKDKLKLEHKGLAHEIFITILRGLSGSKVTKPGTFRSHQDGYAVKSSLKAEDGV
LYPLEKSFFFLPKPPTLILHEEIDYVEFERHTAGGSNMHYFDLLIRLKTEQEHLFRNIQR
NEYQRLFVFVNQKGLKIMNLGSAKSIDGVASVLKDVDVDPHLERIKNEAIGDDSDEEDED
FVADKDDGGSPSDDSGEGESDASESGEEKEAPVKKKTKKEPSAPKVPSIRKKAKDGEDDG
SKKKKQKKKKDPNAPKRAISAFMFFSQTERENVKKSNPGISFTEVGKVLGERWNKMTADE
KSPYEAKARADKKRYSEEISGYKNPQTTNADTADAPDNA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcattcgttcaacaacatctctctcggaggtcgtggaggaaccaattcaggg
caacttaagcttcattcaggtggggtagtatggaagaaacaaggaggtggcaaagcagtt
gaagtagataaaagtgatttgctgggccttacctggatgaaggttccacgatctaatcaa
cttggcgttcggaccaaagatggtctttattataaattcactggttttcgggatcaggat
gtcgccagtctgactacatttttccagtccaattttggaaaaacaccagaggagaagcaa
ctctccattagtggaaaaaattggggagaagttgatctaaatgggaatatgcttactttt
cttgtgggtgctaaacaagcattcgagatttctctagcggacgttgcacagacccagctt
caaggaaaaaatgatgtgatgctggaattccatgtagatgatacaactggggccaacgag
aaagactcattaatggaaataagttttcacattcccaattcaaacactcaatttgttggg
gatgaaagtcacccttctgcccaggtgttccgagacaagattgtctcaatggcagatgtt
ggagcgggaggtgaagaaggtgttgtcacttttgatggaattgccatactcacaccgagg
gggcgatataacattgaacttcatctgtcatttttgcgcctccaaggacaagcaaatgac
ttcaaaattcagtacagcagtgttgttcgtgttttttggttgcctaagtctaaccaacca
catacttttgtagttgttacgctagacccaccaattcggaagggtcagaccttatatcct
catattgtgatgcagtttgagacagattctgtgatagacaccacattatcgattaaggaa
gacctttataatgccaagtataaggacaagcttaagctagagcataagggactcgcgcat
gagatctttattacaattctccgtggtttatctggctccaaagtgactaaacctggaact
ttccgtagtcatcaggatggctatgctgtgaagtcatcacttaaagctgaagatggtgtt
ctttatcctcttgaaaagagcttcttctttttacccaaaccgcctactctaattcttcat
gaggagatcgactatgtggagtttgagaggcatactgctggaggttcaaatatgcattac
tttgatcttctcattagacttaagactgagcaggagcatcttttccgaaacattcagaga
aatgagtaccagagactctttgtgtttgttaatcagaaaggtctgaagatcatgaatttg
gggagtgctaagtcgatagatggagttgcatctgttctgaaggatgttgatgttgaccca
catctagagcggataaagaatgaggccattggagatgacagcgatgaggaggatgaggat
tttgtcgctgacaaagatgatggaggctccccatcggatgattctggggaaggagaatct
gacgccagtgaaagcggagaggagaaagaggcgccagtgaaaaagaaaaccaagaaagaa
ccttctgctcccaaggtaccatcgattaggaaaaaagctaaagatggtgaggatgatggg
tcaaagaagaagaagcaaaaaaagaagaaggacccaaatgcgccgaagagggcaattagt
gcctttatgttcttctcccaaacggaaagagagaatgtgaagaagagtaatcctgggatt
tcctttacggaggttggcaaagtgcttggcgaaagatggaataagatgacagcggatgag
aaatctccttatgaagcaaaagcccgggcagacaagaaacgttatagcgaagagatcagt
ggctataagaatccacagaccacaaatgcagacactgcagatgcccctgataatgcttag
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