Sesamum indicum (sesame): 105168012 Help Entry 105168012         CDS       T04135                                  Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism sind  Sesamum indicum (sesame) Pathway sind04120   Ubiquitin mediated proteolysis sind04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:sind00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     105168012  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     105168012  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:sind04121]     105168012 Enzymes [BR:sind01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      105168012 Ubiquitin system [BR:sind04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     105168012   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      105168012 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 zf-C3HC4_2 Beta-prop_WDR19_1st Beta-prop_HPS5 EIF3I WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_EML zf-C3HC4 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_RFWD3 WD40_like zf-C3HC4_3 zf-RING_2 Beta-prop_WDR75_1st Beta-prop_DCAF12 zf-RING_UBOX zf-C3HC4_4 Beta-prop_WDR35_TULP_N Beta-prop_SCAP U-box zf-RING_5 Beta-prop_IFT122_2nd zf-rbx1 zf-RING_10 Motif Other DBs NCBI-GeneID:  105168012 NCBI-ProteinID:  XP_011086216 UniProt:  A0A6I9TKC0 LinkDB All DBs Position LG8:complement(8908988..8916363) Genome browser AA seq 694 aa AA seqDB search MHLETDENLSLLADPQQMGGQTTSIAGALVPTVKSEPADSSAEPPSAMPPPPSQKLQDLE EVDKDILCPICMQIIKDAFLTVCGHSFCYMCIVTHLQNKSNCPCCSHFLTTNHIYPNFLL NKLLTKTSARQIAKSGTPLEQLRQALEQGCEASIKELESLLYLIAEKKSKMEREEAETNL QILLDFLHCLKKKKLDELSEIQSDLQYIKEDIHAVERRRIELCRRRDRYSAKLRMLIDDP PSKSALPLLMDKHCGLSVSRTAMAPGQGRMSSGGSQNRKVDGKSSASPLILRKDSYGGSD TQSLTHSGLALARKRRVHAQFNDLQDCYLQKRRYWARLSSEKQERDRHGSNLEGYSEGLE DFQSVLSTFTRYSRLRVVAELRHGDLFHSANIVSSIEFDRDDELFATAGVSRRIKIFEFS SVVNEPSDVQCPVAEMSTRSKLSCLSWNKYAKNHIASSDYEGIVTVWDVTTRQSVMEYEE HEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTKQEASVLNIDMKANICSVKYNPGSSIHI AVGSADHHIHYYDLRKISQPLHIFSGHRKAVSYVKFLSNNELASASTDSTLRLWDVNENV PLRVFRGHANEKNFVGLTVNSEYIACGSETNEVFVYHKAISRPAAWHRFVSTDTDEADED AGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAP NT seq 2085 nt NT seq  +upstreamnt  +downstreamnt atgcatttggaaaccgacgaaaatctctctctccttgctgatccacagcaaatgggaggc cagaccacttcaatcgccggcgctttagtccctaccgtcaagtccgagccggcagattcc tctgccgaaccgccatcagctatgccgccgccgccatcccagaagctgcaggatctcgag gaggtcgataaagatattctgtgtccgatatgcatgcaaatcataaaggatgcgtttttg acggtctgtggacatagtttttgctacatgtgtatcgtgactcatcttcagaacaagagt aattgtccttgttgctctcatttcctcaccaccaatcatatataccccaatttcctcctt aacaagttactgacgaagacatcggctcgtcaaatagcaaaaagtggcactcctttggaa cagcttcgccaggcattagaacagggatgcgaagcgtcaattaaggagcttgagagcctc ttgtatcttattgctgagaagaaaagcaaaatggagcgagaagaagctgagacaaatcta cagattctgcttgattttctgcattgtttgaaaaagaaaaaacttgatgagctgagtgag attcaatctgacctccaatacattaaagaagatattcatgctgtggagagacgtcgaata gagttgtgccggagaagggatagatactccgcaaaactgagaatgcttatcgacgatccc ccttccaaatcggcattacctttgcttatggataaacattgtggtctcagtgtttctaga actgctatggcaccaggccaaggccgcatgagttctggcgggtcccaaaatagaaaagtt gatggaaaatcttctgcaagtcctttaatcctaaggaaggattcttatggtgggtcagac acccaaagtcttactcattctggactggcattggcaagaaagaggcgggtgcatgcacag ttcaatgatctacaagactgttacttgcaaaagcggcgatattgggcgagactatcttca gaaaagcaagaacgggatagacatggttccaatttagaaggttacagtgaaggacttgaa gattttcagtctgtcctgtcaaccttcacaagatacagtcggttgcgggttgttgctgag cttagacatggagatttgtttcactcagctaatattgtatcaagtatagaatttgaccga gatgatgaattgtttgctactgctggagtatcaagacgtatcaagatttttgagttttca tcggtagttaatgaaccatctgatgtgcaatgtccagttgcggaaatgtccacacgatca aaactcagctgtttaagctggaacaagtacgcaaaaaatcacatagccagcagcgactat gaaggcattgtaactgtttgggatgtgactactcggcagagtgtgatggaatacgaggag catgaaaaacgtgcctggagtgttgatttttcccgtacagaaccttcaatgcttgtatca gggagtgacgattgcaaggtcaaagtatggtgtacgaaacaggaggcaagtgtgctcaac attgatatgaaagccaatatatgttctgtcaaatataaccctggatccagcattcatata gcggttggttctgcagatcatcatattcattactatgacttaagaaaaatcagccagcca ttacatattttcagtgggcataggaaggctgtatcatatgtgaaatttttgtccaacaat gagcttgcttctgcatctactgacagtacattgcgcctatgggatgttaatgaaaatgtt ccgctacgcgtattcaggggccatgcaaatgagaagaactttgtgggcctaacggttaat agtgaatacatagcctgcggcagtgaaacaaatgaggtgtttgtgtatcacaaggcaatt tctagacccgcagcgtggcatagattcgtgagtactgacacagatgaagcagatgaagac gcagggtcatacttcattagtgctgtgtgttggaaaagtgatagcccaactatgctaaca gctaacagtcaagggacaataaaggttcttgtacttgcgccttga

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