Sesamum indicum (sesame): 105168045
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Entry
105168045 CDS
T04135
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03013
Nucleocytoplasmic transport
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105168045
09122 Translation
03013 Nucleocytoplasmic transport
105168045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105168045
03041 Spliceosome [BR:
sind03041
]
105168045
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105168045
Spliceosome [BR:
sind03041
]
Complex C
Other components
EJC/TREX
105168045
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105168045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Herpes_UL92
Motif
Other DBs
NCBI-GeneID:
105168045
NCBI-ProteinID:
XP_011086264
UniProt:
A0A6I9TKF5
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All DBs
Position
LG1:14617874..14632398
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AA seq
609 aa
AA seq
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MDLFRKAILHPGPPQDFALQTVQQVIKPQKQVKLVQDENQLLENMLRTLLQELVSAAVQS
GEEIMQYGQSIADGETRHGQIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKD
IFGYIESKQDILGKPELFARGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHFFPLSE
RSAVNIKGVFNTSNETKYEKEAPDCSSIDFNFYKTFWSLQEFFSNPASIAPALTKWHKFT
SSLTVVLNTFEAQPLSDEEGNAINLEDESSNFSIKYLTSSNLIGLELKDPSFRRHVLVQC
LILFDYLKAPGKNEKDLPSDTMKEEIKTCEERVKKLLETTPPRGKEFLHSIEHILERERN
WVWWKRDGCPPFEKQPIEKKLGQDGGRKRRPRWRLGNKELSQLWKWADQNPNALTDPQRV
RTPVIMDYWKPLAEDMDESAGIEEEYHHKNNRVYCWKGLRFSARQDLEGFSRFTEHGIEG
VVPLELLPADVRSKYQAKPGDRSKRAKKEETKGSVQQVEESQIATPASETDADGSRIDPE
ASAAPTDTDAMVASGSLSQGGTPTPDEHQKQSSDTDAGLEAGQIEADTEAEAGMVDGETD
AEVDLDVVA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggatttattcagaaaagcaattctgcatccgggaccgcctcaagatttcgctcttcag
actgtgcaacaagttataaaaccccagaagcaagtgaaacttgttcaggatgaaaatcag
ttgttggagaatatgctgcggactctgctgcaggagcttgtgtcagctgcagttcagtct
ggtgaggaaattatgcaatatggtcaatcaatagctgatggggaaactcgtcatggtcaa
ataccccgtctacttgacattgtcttgtacctatgtgagaaagaacatgttgaaggtggc
atgatttttcagcttttagaagatttgacagaaatgtctacaatgagaaattgtaaagat
atttttgggtatattgaaagtaaacaagacattcttgggaagccagagctttttgccaga
gggaagcttgtaatgctgagaacatgcaatcaacttcttcgtcgcctatcaaaggcaaac
gatgttgtattctgcggacgaattataatgtttcttgctcatttttttcctttatcagaa
cgttcagctgtcaatatcaaaggtgttttcaatacatcgaatgagacaaaatacgagaaa
gaagccccagattgtagttctattgatttcaacttttacaaaaccttttggagtttgcag
gaattcttttccaatcctgcttctattgcgcctgctcttacaaagtggcataagtttact
tccagtttgacggttgtattgaatacattcgaggctcagcctttgagtgatgaagaaggc
aatgctattaaccttgaggatgagtcgtcaaacttcagtataaaatatctcacgagcagt
aatctaataggtttggagttaaaggatccaagttttcgacgacatgttctggttcaatgt
cttattctgtttgattatctgaaggccccagggaaaaatgagaaggacttgccatctgat
acaatgaaggaagagataaaaacttgtgaagagcgggtcaagaagcttctggaaacgacg
cctccgagaggaaaagaatttcttcatagcattgagcatattttggagcgtgaaaggaat
tgggtttggtggaagcgcgacggttgccccccatttgagaaacaaccaatagagaaaaag
ctaggtcaagatggaggcagaaaacgtcggcctcggtggagactgggaaataaagaactt
tcccagctttggaaatgggcagatcaaaatccgaatgctttgacagatcctcagcgtgtt
cgtactcctgtcatcatggattactggaaaccactggctgaagatatggacgaatctgca
ggaatagaagaagaatatcatcacaaaaataatcgagtctattgctggaaaggtttaagg
ttctcagctcggcaagatctggaggggttttctagattcactgaacatggtatcgagggt
gtggttcctttggagcttttgccagctgatgtgcggtccaaatatcaagctaaaccaggt
gatcgatccaagcgtgccaagaaggaagagactaaaggttctgtgcagcaagtggaagaa
tctcagattgctacacctgcaagcgagaccgacgctgatggaagcagaattgaccctgaa
gcctcagcagctccaacagacaccgatgctatggtagcatctggtagtctttctcagggt
ggaactccaactccagatgaacatcaaaagcagagctctgacacagatgctggtcttgaa
gcaggccaaattgaagcagatactgaagcggaggccggtatggttgatggggagacagat
gctgaggttgatttggatgttgtagcctga
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