KEGG   Sesamum indicum (sesame): 105168051
Entry
105168051         CDS       T04135                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03018  RNA degradation
sind03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105168051
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105168051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sind03019]
    105168051
   03041 Spliceosome [BR:sind03041]
    105168051
Messenger RNA biogenesis [BR:sind03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105168051
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105168051
Spliceosome [BR:sind03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105168051
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 105168051
NCBI-ProteinID: XP_011086268
UniProt: A0A6I9TXR8
LinkDB
Position
LG8:9107748..9110907
AA seq 99 aa
MSGRKETVLDLAKFVNKGVQVKLDGGRQVTGTLKGYDHLLNLVLDEAIEFLRDPDDPLKT
TDQTRRLGLIVCRGTAVMLVSGSDGTAEIANPFVQPDGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtctggtcgaaaagaaacagttttggatttggcgaagtttgtcaacaagggtgtccaa
gtcaagttagatggtggaagacaagtgactgggacgttaaaaggatatgaccatttgctg
aatcttgttttggatgaagcaattgaatttctcagagaccctgatgatccactgaaaact
actgaccagacgcggcgccttggcttaatagtgtgtcgggggactgccgtgatgcttgtt
tccggcagcgacgggacagctgagattgccaacccatttgtccagccggatggggcgtag

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