Sesamum indicum (sesame): 105168051
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Entry
105168051 CDS
T04135
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03018
RNA degradation
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105168051
09123 Folding, sorting and degradation
03018 RNA degradation
105168051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105168051
03041 Spliceosome [BR:
sind03041
]
105168051
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105168051
mRNA degradation factors
5'-3' decay
Lsm complex
105168051
Spliceosome [BR:
sind03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105168051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
105168051
NCBI-ProteinID:
XP_011086268
UniProt:
A0A6I9TXR8
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Position
LG8:9107748..9110907
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AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVNKGVQVKLDGGRQVTGTLKGYDHLLNLVLDEAIEFLRDPDDPLKT
TDQTRRLGLIVCRGTAVMLVSGSDGTAEIANPFVQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcgaaaagaaacagttttggatttggcgaagtttgtcaacaagggtgtccaa
gtcaagttagatggtggaagacaagtgactgggacgttaaaaggatatgaccatttgctg
aatcttgttttggatgaagcaattgaatttctcagagaccctgatgatccactgaaaact
actgaccagacgcggcgccttggcttaatagtgtgtcgggggactgccgtgatgcttgtt
tccggcagcgacgggacagctgagattgccaacccatttgtccagccggatggggcgtag
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