Sesamum indicum (sesame): 105168213
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Entry
105168213 CDS
T04135
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03410
Base excision repair
sind03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105168213
03450 Non-homologous end-joining
105168213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sind03400
]
105168213
Enzymes [BR:
sind01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
105168213
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
105168213
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
105168213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
HHH_5
NTP_transf_2
IMS_HHH_1
IMS_HHH
Cdd1
Motif
Other DBs
NCBI-GeneID:
105168213
NCBI-ProteinID:
XP_011086493
UniProt:
A0A6I9TYD4
LinkDB
All DBs
Position
LG8:10666876..10674720
Genome browser
AA seq
545 aa
AA seq
DB search
MAPKAKNKSPPSDPNGMFSGMAVFSVRKGVQARRLQIWKQKLVQMGARVEDRFSRRVSHI
FAVDLNALLQEINRESLKRFEGKVLNYQWLEDSLRAGEKVPEASYILSMDSEQDYRSKVT
QGNHLKHTNGNHLSIEDPSPPKKIKTCSEEYKAVGSEKKDQVSIDAPNYSSKSDSANSSC
RSAHSLSPEVTSLSLDGQNGAVSSSDTSLLYSPPDLNRNITEIFGKLIDIYRALGDDRRS
FSYYKAIPVIEKLPFKIESADQVKHLPGIGKSLQDHIQEIANTGKLSKLEHFEKDEKVRT
ISLFGEVWGIGPATASKLYDKGHRTLDDLKNEESLTNSQRLGLKYFDDIKTRIPRHEVQE
MESLLQKVGEEILPGVVIICGGSYRRGKASCGDMDIVITHPDGKSHTGFLPKFVKHLKDK
NFLREDLVYSIHSEEGTDSGVDTYFGLCTYPGRELRHRIDFKVYPRDIYAFGLIAWTGND
VLNRRLRLLAESKGFRLDDTGLFPATHGSGGKRGSKGSASLKFGTEKEVFDFLGFPWLEP
NQRNL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaaggctaagaacaaatctccgccgtctgatcctaatggaatgttctccggg
atggcggtgttctcggtcagaaaaggcgtccaagctcgtcggctccagatttggaagcaa
aaattggttcaaatgggggctagagttgaggatcgtttttcccgaagggttagccacatt
ttcgcggtggatttaaatgcacttctccaagaaattaacagggaaagcttgaagcggttc
gagggaaaagttctcaactatcagtggctagaggacagcttgagagcaggagaaaaagtg
cctgaagcctcatacatcctgtcaatggactctgaacaagattataggagcaaagttact
caggggaaccatctgaaacataccaatggaaatcatttgagtattgaagatccatctcca
ccaaagaagattaaaacctgttctgaggagtacaaagctgttgggtccgaaaaaaaagac
caagtttcaattgatgcccctaattattcctcaaaatcggatagtgctaacagctcatgc
cgctctgcgcactctttaagcccagaagtcacaagtctgagtttggatggtcaaaatgga
gctgtctcatcatctgatacatcattgctttatagtcctcctgatctgaacaggaatatt
actgagatatttggaaagcttattgacatttaccgagccctgggtgatgaccggaggtct
tttagctattataaggctatccccgttattgaaaaattgccttttaaaattgaaagcgca
gaccaggtcaaacatctacctgggataggaaagtcattgcaggatcacattcaggaaata
gcgaacactggaaagttatccaagttggagcacttcgagaaggatgagaaggtacgcacc
ataagtttatttggagaagtatggggcattggacctgccacagcgtcaaaactttacgat
aaaggacacaggactctggatgatttgaaaaatgaggaatcattaacaaattcccagagg
ttaggcttgaaatactttgatgacatcaagacaagaattccacggcatgaggtccaagaa
atggaaagtcttctacaaaaagttggagaagagattttgcctggggtagtaattatttgt
ggaggatcatatagacgtggaaaggcttcttgtggggatatggacattgtgattacacat
cctgatggaaaaagtcatactggatttctcccgaagtttgtgaagcatcttaaggataaa
aacttcttgagagaggatctggtctatagcatacacagtgaggagggcactgattctgga
gtggatacatattttggtctttgcacttatcctggtcgagagttacgacaccgcatagat
ttcaaggtttatccaagggatatttatgcatttggattaatagcatggacagggaatgat
gtattaaacaggaggctgagattattagcagaatcaaaaggattcagactcgatgacaca
ggattgtttcctgccactcatggttcaggcggcaaacgggggagcaaaggcagtgcaagc
ttgaagtttggaactgaaaaggaggtgtttgatttcctcggattcccatggctcgagcct
aatcagaggaatttgtga
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