Sesamum indicum (sesame): 105168241
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Entry
105168241 CDS
T04135
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105168241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105168241
Spliceosome [BR:
sind03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105168241
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
105168241
NCBI-ProteinID:
XP_011086545
UniProt:
A0A6I9TYH9
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Position
LG8:10938603..10943430
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AA seq
483 aa
AA seq
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MATLNDSFLADLDELSDNEDDLLDADNDNAEHMEEDIDGDLADIEALNYDDLDSVSKLQK
TQRYTDIMQKVEDALEKGSDNSSQGLVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEDVLQKTIDACDRALALDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
SALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYLEQTEIFQSTPPALRMRACRLLAAK
STLAARVDSTRGDPTGKTGRSFRAEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSRLAA
KVAKKFKERNYGSSGATSGLTSSLAFTPVQGIELSNPQANQLGGGTQSTYFSETGTFSKI
KKT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttaatgactcttttctggctgatcttgatgaattgtctgataatgaagac
gatcttctggatgcggacaatgacaacgccgagcacatggaagaagatatagatggtgac
ttggcagatatagaagcacttaattatgatgatttggatagtgtgtccaaactacaaaaa
actcagcgctatactgacatcatgcagaaagttgaagatgcgctggaaaagggatctgat
aactcgtctcaaggacttgttttggaagacgatccagaataccagttgatagttgattgt
aatgccttgtcggtcgatattgaaaatgaaatagtgataatccacaattttatccgtgac
aagtatcggttaaaatttccggagcttgagtctctggttcatcaccccattgattatgct
cgtgttgttaaaaagattgggaatgagatggatctgacacttgttgatctagaaggtctt
ttaccctctgccattattatggtggtttcagttacagcatcgactaccagtggcaagcct
cttcctgaggatgtcttgcagaaaacaattgatgcatgcgaccgagctcttgctctagat
tcagcaaagaaaaaggttcttgattttgtggagagtcgaatgggatatattgctccaaat
ctttctgctatagttggcagtgctgttgctgcaaaactaatggggacagctggtggtctc
tcagcattggcaaaaatgcctgcttgtaatgttcagcttcttggtgccaaaaggaagaac
ttggcagggttttcaacagcaacatcccaatttcgtgtcgggtatctcgaacaaacagag
atattccagagcactcctcctgccttgaggatgcgtgcctgccgacttctggctgcaaaa
tctactcttgcggcacgggtagattctactagaggagatccaactgggaaaactggaaga
agttttcgtgcagagattcacaaaaagatagagaaatggcaagagccccctcctgcgaag
cagcctaaacctcttcctgttcctgattctgagcctaaaaagaagagaggtggtcgaagg
ttgaggaagatgaaagaaagatatgctattacagacatgcggaagctggcaaataggatg
caatttggggtaccagaggagagctccttaggtgatggactgggagaaggatatggaatg
cttggacaggctggcagtggtaagctgcgtgtatcagttggtcagagcaggcttgctgct
aaagtagccaagaaatttaaggagagaaattacggaagcagtggtgcgacttctggactc
acttcaagtctggccttcacacctgtgcagggtattgagctttcaaatcctcaggcaaac
cagctgggtggtggaactcaaagtacttacttttcagaaactggaactttttccaagatc
aagaaaacatga
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