Sesamum indicum (sesame): 105168556
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Entry
105168556 CDS
T04135
Name
(RefSeq) autophagy-related protein 16
KO
K17890
autophagy-related protein 16-1
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
105168556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sind04131
]
105168556
03029 Mitochondrial biogenesis [BR:
sind03029
]
105168556
Membrane trafficking [BR:
sind04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
105168556
Others
Specific organelles associated proteins
Auto phagosome
105168556
Mitochondrial biogenesis [BR:
sind03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
105168556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_SCAP
ATG16
Beta-prop_TEP1_C
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_SPT8
WDR54
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_VPS8
eIF2A
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Ge1_WD40
Cytochrom_D1
Beta-prop_RIG_1st
DUF7165
PQQ_2
KNTC1_N
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
105168556
NCBI-ProteinID:
XP_011086991
UniProt:
A0A6I9TM73
LinkDB
All DBs
Position
LG8:complement(14075263..14079011)
Genome browser
AA seq
509 aa
AA seq
DB search
MSQEDVAMGAIKHALKALRKRHLLEEGAHSPAFIALSRPIVSQGSEWKEKAENLEVELQQ
CYKAQSRLSEQLVVEVAESRTSKALIQEKECMISELQNELSQARDECSRLAVQLEEKTKA
LELLISEHQDLKGQLEATVLRANNAEAENKMLIDRWMLEKMKDAERLNEANAIYEDMLDR
VKGSSIQLLARQQVDGVVRQSEEGAEYYVESTIPTICKQRIPAHEGGCASVLFEYNSSKL
VSGGQDKTVKMWDTHTGSLSRTLYGCLGSVLDVCITHDNKSVIAASSANNLYVWDVSSGR
VRHTLTGHVDKVCAVDVSKVSNRNVVSAAYDRTIKVWDLQKGYCVNTLIFHSNCNALCFS
MDGQTICSGHVDGNLRLWDIQTGKLLSEVAAHSFAVTSLSLSRNGNVILSSGRDNLHNLF
DMRTLEICATLRGNGNRVASNWSRSCISPDDGYVAAGSADGSVHIWSVTNAKVVSTLKEH
TSPVLCCSWSNLGKPLATSDKNGNICVWS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagaagatgtagcaatgggagcgataaagcacgctttgaaagctctgagaaag
cggcatttactggaagagggcgctcattcacctgctttcatcgctctctctcgcccgatt
gtgtctcagggctcagagtggaaagaaaaagctgaaaatcttgaagtggagctccagcag
tgttacaaagctcaatctcgactatcagaacaacttgtggtggaagtagctgaatccaga
acttcaaaagctttaatacaagagaaagaatgcatgatatctgagttgcaaaatgagctt
agtcaagcaagggatgaatgctcccgtttagctgtgcagttagaagaaaagaccaaggcc
ctagaattattgataagcgaacaccaggatcttaaaggacaacttgaagcaaccgttctt
agagcaaacaatgcggaggccgaaaacaagatgctaatcgaccgttggatgttagagaaa
atgaaagatgccgaacgcctgaatgaggcaaatgctatttatgaggacatgcttgatcgt
gtcaaaggaagcagcatacaacttctagcccgtcaacaagttgatggtgtagtccgccaa
agtgaagaaggtgcggagtattatgttgagtcaaccattccgactatatgcaaacagaga
atccctgcccatgaaggtggctgtgcctctgtactgttcgagtataattccagtaaattg
gttagcggaggacaggacaaaacagttaaaatgtgggacacacacacagggtcactaagt
cgcaccctttatggttgtcttggctctgttcttgatgtctgcattacacatgataacaaa
tctgttattgcagccagtagtgcaaacaatttgtatgtatgggatgtaagttctggtcgg
gtgcgacacactctcactggccatgtggataaagtctgtgcagtggatgtcagcaaggtg
tccaatcgaaacgttgtgagtgctgcttatgaccgcacgataaaggtctgggatctgcag
aaaggctactgtgtaaacactcttatattccacagcaattgcaatgccctttgttttagc
atggatgggcagaccatttgttctggccatgtagacgggaatctccgactatgggatatt
cagacgggaaaacttctgagtgaggttgcagcacattcttttgctgttacatctctatcc
ttgtccagaaatggaaatgtaattttgtcgagtgggagggacaacttacataatttattt
gatatgcgtacccttgaaatctgtgccacactgagaggcaacggaaacagagtggcatct
aattggagcagatcttgcataagtcctgatgatggttacgttgctgctggatcggctgat
gggtctgtacatatctggtcagtaacaaatgccaaagtagtaagcactctaaaggagcac
acctctccggtgttatgctgttcgtggagtaatcttgggaaacctttggctacctcagac
aagaatggcaacatttgtgtttggtcttga
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integrated database retrieval system