Sesamum indicum (sesame): 105168683
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Entry
105168683 CDS
T04135
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC105168683
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105168683
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105168683
Surveillance factors
Other surveillance factors
105168683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
105168683
NCBI-ProteinID:
XP_020551307
UniProt:
A0A8M8UY05
LinkDB
All DBs
Position
LG8:complement(13062885..13091632)
Genome browser
AA seq
1567 aa
AA seq
DB search
MAESKLDLPEDLIASKPSDQSWTPKASIGNDEDKGLVALLDESKDQAVSESIPLSPQWLY
ARPNEPKTQETRGPSSLSLGSSADLNQKEVWRSEATEDKKDWRRIAPEPDSGRRWREEER
ETGILGRRDRRKMDRRVDNAPGRETTENRSLPATDRWHDVSSRNSGHETRRDKWSLRWGP
DDKEKDARVEKRTDVEKEESQGESQSFVSNSRSVPERDSDSRDKWRPRHRMEGNSGGLGF
RAAPGFGLERGRVEGSNTGFTVGRGRSSVSLVRPPSVVPIGVAQYDKSENVPGKPLSVGT
FVYPRAKLLDIYRKQRLDSSLARMPDNWEEVPPITQLDAIEPFAFVAPDAEQEAILNDIW
KGKIINSGASYSSFRKGGSIDDVSELGEELNIGRQVSLTADVIKEIPDNLVKASVDLHKA
TVDSIFYDNIPKTERTADHKEQYEISEAINRKELDVGSVKSLNGAQSDAFQLKVTGSAVN
QQPLLDSAKSATSFDANNNLPGESNSLFAMPTSDQYWDGQLHEIGSRTNEYQLNRGIPPE
ELSLYYRDPQGEIQGPFLGVDIISWFEQGFFGTDLPVRLEDAPDESPFRELGDVMPHLKF
RHEHDGGSDSIPSVVDGSGWQADCSATSVQHGQSKLPENQRLSKHLYSQGEDFHDEEIVF
PGRPGSGGSAVGKISRGYGEPATSSGNKAYLTNELTDSGMSDQKGSKMHPLGLLWSELES
TYGRSDHTPQFGGGAQDKIINPASGRIAPFNAMPDPTRVPEAWSDVYGSSALSDSNLYQD
VLDARHSSGMDQEFNRFDLAEKLLPQQLQQQHLQSHSMMPPHNTHFNEVMLEGDPSLSLM
HHNKLASQTARDMEHIVALQLQQQRQLQLQQQQQLQKQQHFHQQQILLKEQQQSQARQLL
LEQLLQSQLRESGRGQSHMDALRSNAALEQAILKQQILNDLQQRSQFPSRHPDPSLEQLI
QAKFGQMPHQGHQNDLLELLSHGRHGQIYPLDQQIIQQDQLHGSQLPLGLRQRLEMEEEM
QMGRGWPLDEASQFHRNPAASHRAISAGFSPLDFYSQQLPPSEEHISHLGRNLSVQDRLQ
PGLYDPGMLPFERALSLPGGAAGVNRDVVNSLARAQGLELQEQIPRMHPGSQVDGFSSGI
YSQHTNHPFWSENNGQSSNDWMESRLQQLHLHNERQRRELEARRSTDDPSLWMSSGNDDN
SKRLLMELLHQKSGHPSSEQFDLVNGIPHDRRPPSDHRSGTSMANQSFSVVADQESGFSN
SFTVGSFGSDSGVQPQSRLSEGITNVLEIGGLPYRSKDVAEVAGEPFVSRTGETAQVSND
NFTMKNKAAKRLTSSNGEEQRVLINECNIQGMTSEPQEGLVERAALPSVDRVEMPVNVLS
KHNSLDSAGFQNEKAGSGDSFPEDAAKEKLRSSSSKAPDNVLLRRPPVSRAASSHEGLSE
VTADRVARGKSLSNTVPPDGVRREPGVNVGNTDASGRRDAQFRRTSSCNDADVLETSFSD
MLKSSAKKAAPQETHASAGAAESSDGMPGGRNNKKKGKKGRQIDPALLGFKVTSNRIMMG
EIQRIDD
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagcaagctagatcttccggaggatctcatcgcatctaagccgtccgatcaa
tcgtggactccaaaagcttccattggaaatgatgaggacaagggtttggtggcattactg
gacgaatccaaggatcaggcagtgtccgagagcattccattgtctccacagtggctttat
gcgaggccaaatgaacctaagacgcaggaaacccgggggccaagttctctgtcacttggt
agttctgctgatttgaaccagaaggaggtttggcgctcagaagcaactgaggacaaaaag
gattggagaagaattgctccagaacctgatagtggacgccgctggcgtgaagaagaaagg
gaaactgggatacttggtcgaagggatcgcaggaagatggatagacgggttgacaacgct
ccaggcagagaaacaactgaaaatagatctttgcccgccactgacagatggcatgatgtt
agtagccgcaactctgggcatgaaacgaggcgtgacaaatggtctttaagatggggtcct
gatgacaaagaaaaggatgctcgggtggagaaaaggacagatgtagagaaggaagagtcc
cagggtgagagccaatcatttgtgtctaatagccgttctgttcctgaacgcgattcagat
tctcgtgataagtggaggcctcgacacaggatggagggaaattctggcgggttgggtttt
cgcgctgcaccaggatttggacttgaaaggggacgagttgagggctcaaatacgggcttt
actgtagggcgtggcaggtcgagtgtttctcttgtaagaccgccatctgtggttccaatt
ggtgttgctcagtatgacaagagtgaaaatgttcccggaaaacccctctctgttggaaca
tttgtttacccaagggccaaactacttgacatataccgtaagcaaagacttgattcatcc
cttgcccgcatgcctgacaattgggaggaagttcctccaataactcaattagatgctatt
gaacctttcgcttttgttgctcctgatgctgagcaggaggctatcctaaatgacatatgg
aagggtaaaataataaacagtggagcctcatacagttcgtttaggaagggcggatcaatt
gatgatgtttcagaattgggagaagaattgaacattggaagacaggtttccctcactgct
gatgtcatcaaagagataccagataaccttgtgaaagcttcagtggatcttcataaagct
acggttgacagcatcttctacgataatatacctaaaacagagagaactgctgatcacaaa
gagcaatatgaaatttcagaggctataaacagaaaagaactggatgttggtagcgtaaaa
tctctgaatggtgctcagtctgatgcctttcagctcaaggtaacaggttctgctgttaat
cagcagcctctgttagatagtgccaaatctgctacatcatttgatgctaacaacaatctt
cccggtgaatcgaactccctctttgctatgccaacatcggaccagtattgggatggacag
ctacatgagattggaagcagaaccaatgaatatcagctgaatagaggaattcctccagag
gaattaagtttgtattatcgggatcctcaaggggaaatccagggaccttttcttggagtg
gatatcatttcatggtttgagcaaggcttttttgggactgatttacctgtacgtttggaa
gatgctcctgatgagtcaccattccgggaattgggagatgttatgcctcacttgaaattc
agacatgagcatgatggtggatctgattccattccttcagtagtggatggctcaggctgg
caagctgattgcagtgctacctctgtacagcacggtcaatcgaagttacccgaaaatcaa
cgtttgtcaaaacacttgtactcccaaggagaagatttccatgatgaagaaatcgtgttc
cctgggagacccggaagtggtggcagtgctgtagggaagatttctagaggatatggcgaa
cctgctacaagtagtggcaacaaggcttatcttactaatgaactgacagactctggtatg
tcagatcaaaaaggcagcaagatgcatcctcttggtttgttatggtctgagcttgaaagt
acttatggaagaagtgatcatacacctcaatttggtggaggtgcacaagacaagattatt
aaccctgcttctggaaggatcgctccttttaatgcgatgcctgatcctacccgtgtccct
gaggcatggagcgatgtttatggaagcagtgcactttctgattccaacttgtatcaagat
gtcttggacgctcgccactcttcagggatggaccaagaatttaaccgctttgatttagca
gagaagctattgcctcagcaacttcagcagcagcatcttcagtcacatagtatgatgcct
cctcataacacacacttcaacgaagtaatgctagagggggacccaagtctgagtttgatg
caccacaacaagcttgccagtcaaacagcacgagacatggaacacatcgtggcccttcag
ttgcaacagcagaggcagctacaacttcaacaacagcagcagctgcagaaacaacaacat
tttcaccaacagcaaatcttgttgaaagagcaacagcagtctcaggccagacagcttctt
cttgagcagctgttgcagagtcagttgcgtgaatctggtcgtggacagtcgcatatggat
gctcttagatctaatgctgctcttgaacaggccatactgaagcaacaaattctgaatgat
ctgcaacagcgctcccaatttccttcaaggcatccagatccctccctcgagcagctaatt
caagcaaaatttggtcaaatgcctcatcaagggcatcaaaatgatttactggagctcttg
tcacatggaaggcatggacaaatttaccccctggatcaacagattattcagcaagatcag
ctgcatgggagtcagttacctttggggctgaggcagcgattggaaatggaagaagaaatg
caaatgggtcgtgggtggccccttgatgaagctagtcagttccacagaaatcctgctgcc
tctcatagagctatctctgctggattcagccctcttgatttttattcccaacaattacca
ccttccgaggagcatatcagccatcttgggcggaatctttcagtacaagatagacttcaa
cctggtctctatgaccctggcatgttgccttttgagcgcgcattgtcattgccgggtgga
gcagctggggtaaatcgtgatgttgtgaattcattggctcgtgctcaaggtctagaattg
caggagcagattccacggatgcaccctggtagtcaagttgatgggttctcatctggtatt
tactcgcagcataccaaccaccctttctggtctgagaataatggtcaatcatcaaatgac
tggatggagtcaagacttcaacaactacatcttcataatgagaggcagagaagggaattg
gaagccagaaggagtactgatgatcctagtttgtggatgtcctctggaaatgatgacaat
tcaaaacgattgcttatggaattactgcatcagaaatctgggcacccgtcaagtgaacag
tttgatttggttaatggaataccacatgacagaaggcccccttcggatcaccgttctggc
acaagcatggcaaaccagtcatttagtgttgttgcagatcaagaatcaggtttcagcaat
tccttcactgttgggtcttttggttctgattctggtgtacagcctcagagtcgactgtct
gaggggataacaaatgttctcgaaatcggtggattgccttatagatctaaagatgtagca
gaagttgcaggagaaccatttgtttcccgaactggtgaaaccgctcaggtaagcaatgac
aattttaccatgaaaaacaaggcagccaaaagactgacttcctctaatggggaagaacaa
agagtcctcatcaatgaatgtaacattcagggaatgacttcagagcctcaagaaggatta
gtggagcgggctgccttgccttctgtggatagagtcgagatgccggtgaatgtcctcagc
aagcataattcacttgattctgctggttttcaaaatgaaaaggctggatcaggtgattct
tttccggaggatgctgctaaggaaaagttgcgatcgtccagttcaaaagcaccagacaat
gtattgctgcggcgtccacctgtctcacgagctgcatcttctcacgaagggttgtcggag
gtgactgctgatcgtgtcgccagagggaaaagcctttcaaatactgtacctcctgatgga
gtgagacgagaaccaggagttaatgtagggaacacggatgcatctgggagaagagatgca
caatttcgacgaacatcctcctgcaacgatgccgatgtactggagacatcattcagcgac
atgctgaaaagcagtgctaagaaggcagcacctcaagaaacccatgcttcggcaggggca
gcagagtcgtcggacgggatgcctggcggtcgaaacaacaaaaagaaggggaagaaaggt
agacagatagaccctgctcttcttgggttcaaggtgactagcaaccgtattatgatgggc
gaaatacagcggatagacgactaa
DBGET
integrated database retrieval system
