Sesamum indicum (sesame): 105168772
Help
Entry
105168772 CDS
T04135
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105168772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105168772
Enzymes [BR:
sind01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105168772
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105168772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
105168772
NCBI-ProteinID:
XP_011087223
UniProt:
A0A6I9TNL8
LinkDB
All DBs
Position
LG1:15267908..15285223
Genome browser
AA seq
1196 aa
AA seq
DB search
MVGNSNRNDETKAEEVGRKTWRPHLAEEKDYEALRELFKHHIDSFDHMVEHGIERMLLSI
KPVEVFDSFSNLKLRIWFENPEIYPPQKERFSRTMADALYPFECRQAKLTYAGRFMIDVK
FQYDDGVSVREKINFGQFPVMLKSKLCHLRAANDPKKLVRHKEEPSEMGGYFIMNGLERV
IRLLILPKRNYPMSMVRNSFRERREGYSDKAVVIRCVREDQSAVTVKLYYLNNGSARLGF
WIQGREYLLPVGIIMKALIDTTDHEIYVSLTCCYNEKYDRVKGSVGTQLVGERAKIILDE
LQNMSLYTRAQCLQHIGEHFQPLMAGLEKESYSVVADAVLRDYIFVHLDDNIDKFNLLIF
MLQKLFSLVDQTSVPDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLKAKRTLQDEVDNRT
KKFELSSLADVKKVIEKNTPRQIGAAIENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFL
RFLSHFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNNMTSSCRITSY
YDSKGKVKDFLEVRKSILKVLVSIGMTPSLPKLVQAGPPEVLPVLLDGRVVGSIASDIIE
KAVCHLRRLKVAATFAIPEDLEVGYIPLSMGGAYPGLHLFTSASRFVRPVRNILIPPEEG
NNIELIGPFEQVYMEISCPDGGDGGRKNVFPATHEEIHPTGILSVVGNLTPWSDHNQSPR
NMYQCQMGKQTMGFSCQALVARADQKLYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVA
VLAYSGYDMEDAMVLNKSSVDRGMCRGYIYQTETIDLTEQNLRSDRSQRSFGRSNLDRST
HHLIDSDGLPYVGQRISPNEPYCSIYNEITSKVTTNKLKGSEPVYVDYVAVDVKNKKHIQ
KANIRLRHPRNPIIGDKFSSRHGQKGVCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRM
TIAMLLESIAAKGGALHGNFVDATPFSSSMKKNSVGSESESSSLVDELGSMLIARGFNYH
GVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGG
VRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTSLIQSQKKAVRDMIG
RDLPPGRAPKKVTCVACQTSTGMETVAMPYVFRYLAAELAAMNIKMALQLSSGPGA
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcaatagcaatagaaacgatgaaacgaaggcggaggaggtagggaggaagacg
tggcggccgcacttggcggaggagaaggactacgaagcattacgagagcttttcaagcat
catatcgattcgtttgaccatatggtggagcatgggatcgagaggatgttgctgagcatc
aagccggttgaagtttttgactctttctccaacctgaagcttagaatttggtttgagaat
cctgagatatatcctcctcagaaagagaggttttctagaaccatggccgatgctttatat
ccttttgagtgtaggcaagcaaaacttacatatgcagggaggttcatgattgatgttaaa
ttccagtatgatgatggagtcagtgtacgagaaaaaattaattttgggcagttccctgtc
atgttgaagtcaaaactctgtcatcttagagctgcaaatgatcccaaaaaattggttcga
cacaaagaagagccttcggaaatgggaggatactttatcatgaatgggcttgagagagtt
attcggcttcttatattgccaaagaggaattatccgatgagcatggtgcggaactcattt
cgtgaacgacgtgaaggttattctgataaagctgtcgtcataagatgtgtcagggaagat
cagtctgctgtgacagttaaactatactaccttaacaacgggagtgcaaggcttggattc
tggatacaagggagggaatatttgcttcctgttggaatcataatgaaggctctgattgat
acaactgatcatgaaatctatgtgagtttaacatgctgctacaacgagaagtatgaccgg
gtaaaaggatcagttggcacgcagcttgttggtgaaagagctaaaattattttggatgaa
cttcagaacatgtctctttatacccgtgctcagtgtctgcagcatattggggagcatttc
caacctcttatggcgggactggaaaaagaaagctattctgttgtcgctgatgctgtgtta
agagattacatatttgtccatctggatgacaatattgacaagttcaacctactcatcttc
atgttgcagaagctgttttctctcgtagaccagacttctgtaccagacaaccccgattct
ttacaaaaccaagaagttttattgcctggacacttaataactatttatctcaaggaaaaa
ttacaagactggttgctgaaggcaaaacggactcttcaagatgaagttgacaatagaacg
aagaaatttgagttgagcagcttggcagatgtcaagaaagtcattgagaaaaatactcca
cggcaaattggtgcagctatcgagaatttactgaagacaggaagattagttacacaatca
ggtttagatttgcagcagagagctgggatgacagttcaggccgagagactaaattttctg
cgtttcctttcacactttcgtgctgtacatcgaggtgcttcatttgctgggcttcgcact
accagtgtgcgaaagttgttgcctgaatcgtgggggttcctctgtcctgtccacacaccc
gatggggagccatgtgggctgctgaacaatatgacttcttcttgtcggataacttcatat
tatgattctaaagggaaagtgaaggactttcttgaggttcggaagtcgattttaaaagtt
ctggtgagcattggaatgacaccgtcattgccaaagcttgtgcaagcaggtcctcctgaa
gttcttcctgtccttctggatggtcgtgttgtaggttctattgcatctgatattattgag
aaagctgtctgtcacctgcggaggttaaaggttgcagcaacttttgcgatacctgaagat
cttgaggttggttatattcctctgagcatgggtggggcatatcctggcttacacctattc
acttctgcgtccagatttgttcgacccgtgcggaatatcctgatacctcctgaagagggc
aacaacattgagctcattgggccctttgagcaggtctacatggaaataagttgtcctgat
ggtggagacggaggaaggaagaatgtatttcctgccactcatgaagaaattcatccaact
ggaatattgagtgttgttggaaatcttacaccttggtctgatcataatcaaagtcctcgt
aatatgtatcagtgtcagatggggaaacaaacaatgggtttttcttgtcaagctttagtt
gctcgagctgatcaaaagctctatcatcttcagacaccacagacccccattgtgcgtaca
aagacttacgaaaaatataatattgatgactatccattaggaactaatgccattgtggca
gttctagcatattctgggtatgatatggaggacgccatggtactaaataaatcatctgtg
gatcgcggcatgtgtcgtggatacatataccagacagaaacaattgacttgactgaacaa
aacctcaggtcagatcgcagccagagatcatttggaagaagcaacctggaccggtcaact
catcatttgattgattctgacgggctcccctacgttgggcagaggataagccccaatgag
ccatactgtagcatctataatgagattacgagtaaagttacgacaaacaagttaaaaggt
tcagagcctgtctatgttgattatgttgctgttgatgttaaaaacaaaaaacatatacaa
aaggcaaacatccgccttcggcatcctagaaatccgataattggtgataaatttagcagt
agacacggtcaaaagggtgtttgttctcagctgtggccagatactgatatgccattttca
ggagttacaggaatgcggccagatctcattatcaatccccatgcattcccttctaggatg
acaattgcaatgcttttagaatcaattgctgccaaggggggcgccttgcatggaaatttt
gtcgatgcaacacctttttcaagctcaatgaagaagaattctgtaggttctgaatctgaa
tccagttcacttgtagacgaacttggttctatgttgattgcgcgtgggttcaattaccat
ggtgtggaggtattgtacagtggagtttatggaacagagctgacatgtgaaatattcatt
gggcctgtatattatcagcgtctccgccatatggtttcagataaatttcaggtgcgttct
acaggaacagtggatcaggtcaccaggcaacctatcaaagggagaaagcgtggtggtggt
gtccgctttggagaaatggaacgagattcccttctggctcatggagctgcatatctgttg
cacgataggctccacacaagttctgatcaccacattgccgatgtgtgttccctttgtggg
agcatcttgactacatcactcatccagtcacaaaaaaaggcagtgcgggatatgattggt
agagatctaccacctggcagagcccccaaaaaggttacctgtgttgcctgccagactagt
acgggaatggagactgtcgcaatgccttatgtcttcagatatttagctgcagaattggca
gccatgaacataaaaatggctcttcaactgagtagtgggccaggagcttaa
DBGET
integrated database retrieval system
