Sesamum indicum (sesame): 105168839
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Entry
105168839 CDS
T04135
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sind03400
]
105168839
Enzymes [BR:
sind01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105168839
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
105168839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_30
AAA_19
DEXQc_Suv3
Pyr_redox
Peptidase_M13_N
DUF4600
Motif
Other DBs
NCBI-GeneID:
105168839
NCBI-ProteinID:
XP_011087302
UniProt:
A0A6I9U0J8
LinkDB
All DBs
Position
LG8:15208009..15242188
Genome browser
AA seq
2086 aa
AA seq
DB search
MLLELPRLTNSLRLPFDADQAYLNRKSYLRNLSRHSSAASPGEWELARKIIYRWDEATVE
VRQLYKQFIAAVVELMGGEVVSEEFQEVALNVYRLFSAAYGSEEDDGDKRVLAKRFELQK
LIGHTIPDANILKVASLVERLSALQKNEHGTVYLPELVSEGSEDLEFGADLVFRPPARFL
VEISLEDAENLVEETSTSSSNHDRWSDYGASANFHPSDCEGNFDLEWLRDTCDRIIRASS
SQLPRDELAMTICRILDSEKPGDEIAGDLLDLVGDSSFETVQDLVMHRKDLVESIHRGLL
VLKSDKSTSNTQVRLPSYATQVTVQTESERQIDKLRRKEEKKHRRGTDHGIENELSSLSF
SSLLQASEKKNFLDDIVGHGDGTQFAATALPQGTVRKHYKGYEEVTVPPTPTAPMKPGEK
LIEIKELDDIAQAAFHGYKSLNRIQSRIFQTTYYSNENILVCAPTGAGKTNIAMISILHE
IGQHFRDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNVTVRELTGDMQLSKNELE
ETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVES
TQSMIRIVGLSATLPNYLEVAQFLRVNPETGLFFFDSSYRPVPLEQHYIGISEHNFLARN
ELMNEICYNKVVDSLRRGHQVMVFVHSRKDTGKTADKLVEMAKRHEDFDLFTNASHPQQG
LMKKEVLKSRNKELVQLFEYAVGIHHAGMLRSDRGLTERLFSEGLLRVLVCTATLAWGVN
LPAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYL
RLLTSQLPIESQFINSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMKMNPLAYGIGW
DEVIADPSLSLKQRALVSDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVET
YNEMLRRHMNDSEVIDMVAHSSEFENIVVREEEQNELETLTRTCPLEVKGGPSSKHGKVS
ILIQLYISRGSIDTFSLVSDASYISSSLARIMRALFEICLRRGWSEMSSFMLEYCKAVDR
QVWPHQHPLRQFDREISTEVLRKLEERGVDLDRLYEMEEKDIGALIRYAPGGKLVKQYLA
YFPMVQLFATVSPITRTVLKVDLTITPEFVWKDRFHGTAQRWWILVEDSENDHIYHSELF
TLTKKMAKGEPQKLSFTVPIFEPHPPQYFIRAISDSWLHAESFYTISLQNLALPEAHTTH
TELLDLKPLPVTALGNETYEALYSFTHFNPIQTQAFHVLYHTDQNVLLGAPTGSGKTISA
ELAMLHLFNTQPDMKVIYIAPLKALVRERMNDWRKRLVSRLGKHMVELTGDYTPDLTALL
EADIIISTPEKWDGISRNWHTRGYVKKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQ
TERSVRFVGLSTALANAHDLADWLGVEENGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMN
SMNKPTYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQYAASDEHPRQFLSIPEESLQMV
LSQVTDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNRIQVLVCTSTLAWGVNLPAHL
VIIKGTEYFDGKAKRYVDFPITDILQMMGRAGRPQYDQHGKAIILVHEPKKSFYKKFLYE
PFPVESSLREQLHDHINAEIVSGTISHKEDAVHYLTWTYLFRRLVVNPAYYGLEDTDPGT
LSSYLSSLVLSTFEDLEDSGCIKIDEDRVEPMILGSIASQYYLKYTTVSMFASNIEADTS
LEVFLHVLAGASEYDELPVRHNEENYNAQLSNKVRYMVDKNLLDDPHVKANLLLQAHFSR
VEMPITDYVTDLKSVLDQSIRIIQAMIDLCANSGWLSSTLTCMHLLQMVMQGLWFDKDSP
LWMLPSMTDELVTTLSQRGVRNVQQLFDLPPSTLQALSRSSTTSRLHEELQHFPRIQTRI
KVQKRTAGDNPSVSLNIRLEKANRHKKTSRAFTPRFPKVKDEAWWLVLGNTSTSQLYALK
RVTFTDVLQTHMNIPSNVNDFQGMKLIIVSDCYVGFEQEHIIEKLV
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atgttgctggagcttccgcggttaaccaattctcttcggctaccttttgatgctgatcaa
gcctatctcaaccggaaatcctacctgcgaaacctcagtcgccatagctctgcagcttct
ccgggagaatgggagctcgctcgtaagattatttatcgatgggatgaagctactgtagag
gtgcggcagttgtacaagcaatttattgcagcagttgtcgagttgatgggtggtgaggtg
gtgtccgaggagtttcaagaagtggcattgaatgtttatagactgtttagtgcggcttat
ggatctgaagaggatgacggtgacaagagagttttggcaaaacggtttgagctgcaaaaa
ctcattggtcatactattcctgatgcaaacatattgaaagttgcatcattggtggagagg
ctttctgctttacagaaaaatgagcatgggactgtttacttaccagaattggtgagtgaa
ggtagtgaggacttggaatttggagcagaccttgtattccgacctcctgctcgctttcta
gttgagatttctttggaagatgcagagaatttggtggaggaaactagcacatcatcctct
aatcatgacagatggtctgattatggtgcctctgcaaatttccatccttccgattgcgaa
gggaattttgacctagagtggttgcgggatacatgtgacagaattatcagggcaagtagt
tcacagcttcctcgtgatgaattagcaatgaccatttgccggattcttgattcagaaaaa
cctggtgatgagattgctggagatttgctggatcttgttggtgatagctcgttcgaaact
gttcaagaccttgtcatgcatagaaaggaccttgttgagagtatccatcgtggactactc
gtactcaaatctgataaatcaacatcaaacacgcaagtgcggttgcccagttatgctact
caggtaactgttcaaacggagtctgagcggcaaattgataaacttcggcgcaaggaggaa
aagaagcatagacgtggaactgatcatgggattgagaatgaattgtcttctttgtctttt
agttccttacttcaagcaagtgagaagaaaaatttccttgatgacattgtggggcatgga
gatgggacccagtttgctgccacagcccttcctcagggcactgtgaggaagcattacaag
ggatatgaagaagtcactgttcctcctacaccaacggcaccaatgaaacctggggagaag
ctgattgagataaaggagctagatgacattgcacaagctgcttttcatggttacaagtct
ttgaaccggattcagagcagaatattccaaacaacttactatagtaacgaaaacatactg
gtatgtgcaccaactggggctggaaaaacaaatatagctatgatttctattctacacgag
attggacaacacttcagagatggctatctgcataaagatgaattcaagatagtttatgtt
gctcctatgaaggcattagctgcagaggttacatcaaccttcagccatcgattatcccct
ttaaatgtaactgtgagagaacttactggtgatatgcaactctccaagaatgaactcgaa
gaaactcagatgattgttacaactcctgaaaagtgggatgtaattactcgtaaaagcagt
gatatgtcactctcaatgcttgtgaagctcctgatcattgatgaagtacatttgttgaac
gatgatagaggtcctgtaatagaagcattagtagctcgcactcttcgtcaggttgaatcc
acacaaagtatgatacgcattgttggcctttctgccactctacccaattatttggaggtt
gcacagtttctgagggtaaatccagaaacaggcctattcttctttgattcaagctatcgc
ccagtaccacttgagcagcattacatcgggatttctgagcacaattttttagctcgtaat
gagttgatgaatgaaatatgctacaataaggttgttgattcactaaggcgaggacatcag
gtcatggtttttgttcattcacggaaagacacggggaaaacagctgacaaactggttgaa
atggctaaaagacatgaggactttgatcttttcacaaatgcttcacatcctcagcaggga
cttatgaagaaggaagttttgaagtccagaaataaggagctcgtccaactttttgaatat
gctgttggcattcatcatgctggaatgctacgttctgacagaggcctcactgaacgactc
ttctccgaggggcttttaagggtgcttgtttgcactgcaactttggcatggggagtgaat
ctgccagctcacactgtggtgattaagggaactcaaatatatgacccaaaggctggtggg
tggcgagatctaggcatgcttgacgttatgcagatatttgggcgtgctggaaggccacaa
tttgacaaaagtggtgaaggcatcataattactagtcatgacaaattagcctattatttg
cgacttttgacaagtcaacttcctattgagtctcagttcatcaactccttgaaagacaac
ttgaatgctgaagtggcattgggcactgtgacaaatgttaaagaagcttgtgcttggcta
ggttacacatatcttttcataaggatgaaaatgaatccgctggcatatggcattggatgg
gatgaggtcattgcagatccttcattgagcctgaaacaaagagctctggtatcagatgct
gcgcgtgctctcgacaaggcaaagatgatgcgctttgatgagaaaagtggaaacttttat
tgtactgagcttggtcgtattgctagccacttttacattcaatattctagtgttgagact
tacaatgaaatgttgagacgccatatgaatgatagtgaggtgattgacatggttgcccat
tcttctgaatttgaaaatattgttgttcgagaggaggaacaaaatgagctggaaacattg
actcgtacatgccccttagaagttaagggtggtccatcaagtaaacatggaaaagtgtcg
attcttattcagttgtacatatccaggggttcaattgatactttttcactagtttctgat
gcatcatatattagttcaagcttggctagaattatgcgggccttatttgagatttgtctg
cggagaggatggagtgagatgtcttccttcatgctggagtactgcaaagctgtggatcgt
caagtttggccccaccaacatccgctcagacaatttgacagagaaatttcaacagaagta
ctgaggaagcttgaagaaagaggtgtggacttagatcgcctatatgagatggaggagaaa
gacattggagctttgattcgctatgcacctggaggaaagttggtcaagcaatacttggcg
tatttcccaatggtccagttatttgctacagtaagtccaatcacaaggactgttctaaag
gttgatttgactattactcctgagttcgtctggaaggatcggttccatggtactgcacag
cgctggtggattttagttgaggattctgagaatgaccatatataccactcagagctcttt
acgttaacaaagaagatggccaaaggggagcctcagaagctatccttcactgttccaata
tttgagccacatcctcctcagtactttattcgtgcaatttcagactcgtggttgcatgca
gagtctttctacacaatatcattgcagaaccttgcactcccagaggcacatacaactcat
actgaactccttgatctgaaaccacttcctgtgactgcacttggaaatgaaacttatgaa
gcattgtatagctttacacacttcaaccccatacagacacaggcttttcatgtactatat
catacagaccaaaatgttcttctaggagctccaacaggaagtggtaaaactatatcagct
gagcttgccatgcttcatctgtttaatactcagccggatatgaaggtcatttacattgca
cctttaaaggctcttgtgcgagaaaggatgaatgattggaggaaacgtcttgtttcccgg
cttgggaaacatatggtggagctgacaggtgattatactccagatctgacggctctatta
gaagctgacattataatttctactccagaaaaatgggatggtatcagtcgtaattggcat
actagaggctatgttaagaaggtgggactaatgatattggatgagattcatctacttggc
gctgatcgtggacccatattggaggttattgtatctcgaatgagatatatatcatcacag
actgagcgttcagttcgctttgttgggctttcaacagctctggcgaatgcacatgatttg
gctgattggctgggtgttgaggaaaatggcttgttcaatttcaagccaagtgttaggcct
gttcctcttgaagtccatatccagggatatcctggaaagttttactgcccaagaatgaat
agcatgaacaaacccacttatgctgcaatttgtacccattcacccacaaaacctgttctt
atatttgtttcatcacgtcgccagactaggcttactgcattggacctcattcagtatgca
gcttcagatgagcacccaaggcagttcctctctataccagaagaatcacttcagatggta
ctttcccaagtaactgaccagaaccttagacacaccctgcagtttggtattgggttgcac
catgcaggattaaatgataaggatagatctcttgttgaggagctttttgcaaataacagg
atccaggtattagtttgcaccagtacattagcatggggtgtgaatcttccagctcatttg
gttattataaagggaacagaatatttcgatggcaaagcaaaaagatatgttgattttcca
attacggatattttacaaatgatgggtcgcgcaggacggcctcagtatgatcagcacggt
aaagctattattctcgttcatgaacccaaaaagagcttctacaaaaagtttctctatgaa
ccatttccagttgaaagcagcctgagagaacagttgcatgatcacatcaatgctgagatt
gtttctggaacaatttctcataaagaggatgcagtgcattatcttacctggacatattta
ttccgtagattggtggttaacccagcttattatggcttagaggatacagatcctggaaca
ctaagttcatacttatcaagcttagtgctaagcacatttgaggatcttgaagacagtggc
tgcattaaaattgatgaagatagggtggagccaatgatattgggttcaatagcatctcag
tattacctaaaatacacaactgtatcaatgtttgcttcaaatatagaagcagacacatca
cttgaagttttcctccatgtattagctggtgcttctgagtatgatgaacttcctgtacga
cacaatgaagaaaattacaacgcacaactctccaataaggttcgctacatggtggacaag
aatcttcttgatgatcctcatgtaaaggcaaatcttcttcttcaggcacacttctcccga
gttgaaatgccaatcaccgactacgtcacagatttgaagtcagtgcttgatcaaagtatt
cgaattatccaggcaatgatagatctatgtgctaacagtggatggctctctagtaccctt
acttgtatgcatcttttgcaaatggtcatgcagggtttgtggtttgacaaagattcgccg
ttatggatgcttccctccatgactgatgaacttgttactacattgagccagagaggagtc
cgaaacgtccagcagttatttgatcttcctccctcaactttgcaggctctcagtagaagt
tccactacctcgaggttacatgaggaattgcagcatttccctcgtatacagacacgaatt
aaagttcagaaacgaactgctggtgataaccctagtgttagtctaaacatcagattggag
aaggcaaatagacataagaaaacatccagagctttcactcctcgctttcctaaggtaaaa
gatgaggcatggtggttggtccttggaaatacttccacctcccaactctatgccttgaag
agagtgactttcacggacgttctgcagacacacatgaatataccatcaaatgtgaatgat
ttccagggtatgaagttgattatagtctcggactgttacgttggttttgagcaagagcac
attattgagaaacttgtttga
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integrated database retrieval system
