KEGG   Sesamum indicum (sesame): 105168921
Entry
105168921         CDS       T04135                                 
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03018  RNA degradation
sind03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105168921
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105168921
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sind03019]
    105168921
   03041 Spliceosome [BR:sind03041]
    105168921
Messenger RNA biogenesis [BR:sind03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105168921
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105168921
Spliceosome [BR:sind03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105168921
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 105168921
NCBI-ProteinID: XP_011087432
UniProt: A0A6I9U0Y2
LinkDB
Position
LG8:complement(15932269..15937230)
AA seq 147 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKTRSDRKPPGVGRGRGRGRDDNAAGRPSKGTGRGIDD
GGSKGGGRGKGVVGSKSSGRGGGRGRG
NT seq 444 nt   +upstreamnt  +downstreamnt
atgctgccactttctctgctcaagactgcacaagggcatcccatgttggtggagctgaaa
aatggggaaacttacaatggccatttagtgaattgtgacacttggatgaatatccatctg
cgtgaagtcatctgtacctcaaaggatggagatagattttggagaatgccggaatgctac
atccgtggtaatacaattaagtacctccgagttccagatgaggttattgataaagttcag
gaagaaacgaagacccgttcagatagaaaaccacctggagttggacgaggaagaggaaga
ggtagagatgacaatgctgctggaaggccgtcaaaagggaccgggcgtggtatagatgat
ggaggttccaaaggtggggggcgaggaaagggtgtggtcggcagcaagtcttctggcaga
ggtggagggcgtggccgtggatga

DBGET integrated database retrieval system