Sesamum indicum (sesame): 105169017
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Entry
105169017 CDS
T04135
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105169017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105169017
03036 Chromosome and associated proteins [BR:
sind03036
]
105169017
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105169017
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105169017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
105169017
NCBI-ProteinID:
XP_011087576
UniProt:
A0A6I9TS25
LinkDB
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Position
LG8:16662765..16670458
Genome browser
AA seq
965 aa
AA seq
DB search
MVTPPTSSHGLFHCSSIDPFWQTIKSRGTCIHPLFGTSTPSGSPKGASAFASKMSSPFGS
TSSGFGGSKCTASNPGIANECQGSKLASYYETPEVNGTNSRYSVGKIKSISAMPIFRAKS
HEELRSEDYKLHKESTFSIRNQGNAFEQPSSQFRPSTPSVPASISLFDSGSGLAFGTATA
ARVSDSPVKPPIGSTGRDFGVWLSSGTSGSISDSNGNQAPRNSASGVSRTTIFGAPNNSG
VGFNPTPTILHSPLAHGSTSSIFDVPNVPSFEPGIASSGFSSSIFGFPSTTAFEGLITSA
SQVSTTPGVGIRSIPSFWATSISLGSSLYGPQSNCTLGAPTTSNFSVSTTSGFLFSSASA
SGNSNIFGIQSSSGSQGATTLESIVGNQYRGSRVAPYSATREVGGANNWYSVEKIQSISA
MPSYKDKSHEELRSQDYELGNKDGQTPWCRRSSGSDCLKSSDTPADFLSCPPLLHHPCVN
SPGHPFKSSPSAPRSQAFITPNSTIFTVPTLYPHVNAIAPTKLYPSPSHSFIAQPTPVAS
MTTSTPNLKPSSLIPFSELMPTNSCQLPAMSTTFPRPSASMFSSSKPSSTVVTALGPWPS
VLNPSQPGQAAEEVHPGSTYNLSQSSQASNGFTVVTGAGSQNANGQQYFSSSTGGMQSSL
VVNPFATRSATDRSNSVTSVQYGISSIPVKNNPSPGRRTSLLRIRHVSLRHSRLPAKRPT
CGHHEPKVPFFCGKEDTPCPVTPFLPRENPRAWLVNSLSGQEHAPLHSYAEGKGCEAEAS
PSSPFQLKEDDSSALVNLHMDDDSALTEKHEDVVLALIPKLPNGEYYTEPSIEELAAKER
AEPGCCSRVNDFVVGRVGYGSIKFLGETDIRNLDLESVVQFKNREVVVYADGRKKPAVGQ
SLNKPAEVTLLNVHCINKKTGQKYIDGPQVGSYKEMLIKKASEQGAEFVSYDPVRGEWKF
RVQNF
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggtgactcctcctacttcctctcatgggctgtttcattgcagcagtattgatccattt
tggcagaccatcaagtcaaggggtacttgtatccatcctttgtttggtacttcaactcct
tctggttctccaaaaggtgcatcagcttttgcttccaaaatgtcgtctccttttggaagc
acttcatcaggttttggaggatccaagtgcactgcatccaatcctggtattgctaacgaa
tgtcaaggaagcaaattagcatcatattatgagacaccagaagtaaatggaacaaatagt
aggtattctgttggaaaaatcaaatcaatctctgcgatgcccatttttagagctaaaagt
catgaagagttgaggtcagaggactacaagttacacaaggaatccactttttcaatccgg
aaccaagggaatgcatttgaacaacctagctctcaattccgtccttccactccgtctgtg
ccagcaagtatatccttgtttgattctggcagtggactggcctttggtacagcaactgct
gctcgagtatctgattcacctgtcaaaccaccaattggcagtacaggcagagattttggt
gtatggttgtcttctggaacaagtggttcaattagtgatagcaatggtaatcaagctcca
agaaactctgcttccggagtgtcaagaaccacaatatttggtgctcctaacaactcagga
gttggcttcaacccaacaccaacaattttgcactcacctttagcacatggtagcacaagc
tcaatatttgatgttcctaatgtgccatcttttgaacctgggattgcaagcagtggtttc
agcagtagtatatttggatttcctagtactactgcctttgaaggattaatcacttctgct
tcccaagtctctacaacaccaggagttggcattaggtcgataccttcattttgggcaacg
tcgatatcccttggcagcagcttatatggacctcaaagtaactgtactttaggagctcca
accacttccaacttttctgtctcaaccacttcaggatttctcttcagctcagcttcagct
tctggtaacagtaacatatttggaattcagagttcttctggatcccaaggagcaacaact
cttgaatctattgttggcaaccagtaccgaggaagtcgagtagcaccttattctgcaaca
agggaagttggtggggccaataattggtattctgttgagaaaattcagtccatttcagcg
atgccaagttacaaagataaaagccatgaagagttgaggtcacaagattatgaattaggt
aataaagatggacaaacaccttggtgtcgacgctcttcaggttcagattgtttaaagagt
tctgatactccagcagacttcttgagctgcccgccattactgcatcacccttgtgtcaat
tctcccggtcatccatttaaatccagtccgtctgcccctagatcacaagcctttattact
cctaatagtacaattttcacagttccaacactttatccacatgtgaatgcaatcgctcca
accaagctatacccctctccatcacattccttcattgctcaacctactccagttgcttct
atgactacatctaccccaaatctgaagccatcttccttgatcccttttagtgagttaatg
cccacaaatagttgtcagttgcctgcaatgtctacgacattccctcgtccctctgctagc
atgttttcctcaagtaaaccttcatccaccgtcgtaacagcattaggtccatggccatct
gttctgaatccatcacagccaggacaagctgctgaagaagtacatcctggttctacttat
aacctgagtcaatcatcacaagcttcgaatggcttcacagtggtgacgggtgctggcagc
cagaacgccaatgggcaacagtatttttcttccagcactgggggcatgcagtcatcactt
gtggtgaatccttttgccacgcgatctgcaactgatcgatccaattcagtaacatcagta
caatatggaatatcgagcatacctgttaaaaacaatccttcacctggcagaaggacatcc
ttattgagaatccgacatgtgtccttaagacacagcaggttgcctgcaaagagacctact
tgtggacaccatgagcctaaggtgccatttttctgtggtaaagaagataccccttgtcca
gttactccttttcttccgcgggagaatccgagggcttggttagtgaattcgttgtccggg
caagagcatgcgcctcttcattcatatgcagaaggcaaaggttgtgaagccgaagcttct
ccaagttctcccttccaacttaaggaggatgactcgtctgccttagtgaacttgcatatg
gatgatgattctgcactaactgaaaaacatgaggatgttgttttagctctaataccaaag
cttccaaatggagaatactacacagagccttcaatagaggagctggcagctaaggaaagg
gctgaaccaggatgctgcagccgtgtgaatgatttcgttgtcgggagggtgggatatgga
agcatcaaatttcttggagaaacagatatccgcaatcttgatctcgaatctgttgtccag
ttcaaaaatcgggaagtggtggtttatgcggatggaagaaagaagccagcagtcggtcaa
agcctcaacaagcccgctgaggttactctacttaatgtccactgtatcaacaaaaagaca
gggcagaagtacatcgatgggcctcaggttgggagttataaagagatgctgatcaagaag
gcttcagaacaaggagctgagtttgtttcctatgatccagttcgaggggagtggaaattc
agggttcaaaacttctag
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