Sesamum indicum (sesame): 105169165
Help
Entry
105169165 CDS
T04135
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03082
ATP-dependent chromatin remodeling
sind03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105169165
03083 Polycomb repressive complex
105169165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sind03036
]
105169165
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
105169165
Histone modification proteins
HAT complexes
HATB complex
105169165
HDAC complexes
Sin3A-HDAC complex
105169165
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
105169165
PRC2.2
105169165
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
105169165
Heterochromatin formation proteins
Other heterochromatin formation proteins
105169165
Chromatin remodeling factors
NuRD complex
105169165
NuRF complex
105169165
NuRF complex (fruit fly)
105169165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_EML
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
MIOS_WD40
Beta-prop_TEP1_C
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
105169165
NCBI-ProteinID:
XP_020551976
UniProt:
A0A8M8V7A6
LinkDB
All DBs
Position
LG8:complement(17757864..17764792)
Genome browser
AA seq
424 aa
AA seq
DB search
MGKDEDEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRSEFGGFGCANGKVQIIQ
QIDHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTE
GYGLSWSQFKQGYLLSGSDDAQICLWDVNGTPKHKALDAMQIFKIHEGVVEDVSWHLRHE
YLFGSVGDDQYLHIWDLRTPSVSKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDMRKISTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGQPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDDLPGDDS
TKGS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagacgaggatgagatgaggggagaaatagaggagcgcttgataaacgaggag
tacaaaatttggaagaagaacaccccgtttttgtacgatctggttatcacccatgcgctg
gagtggccgtcgctaactgtggagtggctgcccgaccgggaagagcctccgggcaaggat
tactccgtccagaagatgattctggggacacacacttcggagaacgagcccaattattta
atgctggcccaggtacagctgcccctcgaagatgctgaaaatgatgcccgccattacgac
gatgaccgctccgaatttggtggttttggatgcgctaatgggaaggtgcaaattatccag
caaattgatcatgacggggaggtcaatcgggctcgttatatgccacaaaactcatttatt
attgctactaagacagtcagtgcagaggtttatgtttttgattatagtaaacatccatct
aagcctcccttggatggtgcatgcaaccctgatttgagactcagggggcacagtactgaa
ggatatggtttgtcatggagtcagttcaagcagggttatttattgagtggttcagatgat
gcccagatatgcttatgggacgtaaatggaactcctaagcataaggctttagatgcgatg
caaatttttaagattcatgaaggtgtggtagaagatgtttcatggcatctcaggcatgaa
tacttgtttggttctgttggagatgatcagtatctgcatatatgggatctccgtactcca
tcagtgagcaagcctatacagtctgtagttgctcatcaaagtgaggtaaattgtttagct
ttcaatccattcaatgagtgggttgtagcaacaggatctaccgacaagactgttaaatta
tttgatatgcgaaagatttctactgctctccacacgtttgattgccacaaggaggaggtt
ttccaggtaggatggaatcccaagaatgagaccatcttagcttcttgttgtcttggtagg
agattgatggtctgggatcttagcaggattgatgaagaacagacaccggaggatgctgag
gatgggcagccagagctgttattcattcatggtggtcatacaagcaaaatctcagacttc
tcgtggaacccctgtgaagattgggttattgccagtgtagccgaggacaatatactacaa
atctggcagatggcagagaacatctaccatgacgaagatgatctacctggagatgactcc
actaaaggttcctag
DBGET
integrated database retrieval system
