Sesamum indicum (sesame): 105169198
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Entry
105169198 CDS
T04135
Name
(RefSeq) protein RAE1
KO
K14298
mRNA export factor
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105169198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105169198
03036 Chromosome and associated proteins [BR:
sind03036
]
105169198
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105169198
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105169198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
105169198
NCBI-ProteinID:
XP_011087841
UniProt:
A0A6I9TP15
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Position
LG8:complement(17981107..17987392)
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AA seq
348 aa
AA seq
DB search
MATFGAASTNVNPNRSTEVVQPPSDSVSSLSFSPKANFLVATSWDNQVRCWEVMKSGTSV
STVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPVKELA
WIPEMNLLVTGSWDKTLRYWDLRQQNPTWVQQLPERCYALTVRHPLMVVGTADRNLIVFN
LQNPQSEFKRVVSPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQSSKNFTFKCHR
DGNDIYSVNSLNFHPIHHTFATAGSDGAFNFWDKDSKQRLKAMLRCNQPIPCSTFNNDGS
IFAYAVCYDWSKGAENHNPSTAKTYIYLHLPQEAEVKGKPRAGTSSRK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggccacgttcggcgctgcttcgacgaacgtaaacccgaaccgttcaactgaggtggta
caaccgccaagtgattcagtatcgagcctgagctttagtcctaaggccaattttttggtt
gctacttcgtgggataatcaggtaagatgttgggaggtaatgaaatcaggaaccagtgtc
agcactgttcctaaggcatcaatttcacatgaccatccggtcttatgttcaacttggaag
gatgatgggacaactgtcttttctggaggctgtgacaaacaagttaaaatgtggccatta
ttatctggtggccaacccgtgactgtggccatgcatgatgctccagtgaaagagcttgct
tggatcccggaaatgaatctcttagtcacaggaagctgggacaagacacttaggtattgg
gatctgagacagcaaaatcccacttgggtgcaacagcttcccgaacgctgctatgcgctt
actgttagacatcctcttatggttgttggcactgctgatagaaatcttatagttttcaac
ctgcagaaccctcagtcggagtttaagagagtcgtgtcaccgctgaagtaccagactagg
tgcttagctgctttccctgatcagcaaggcttcttagttggctcaattgaagggagagtc
ggtgtacaccatcttgatgattcacaatcaagtaaaaactttactttcaagtgccacaga
gacggcaatgacatttactccgtgaattcactgaattttcatcctatacatcacactttt
gccactgctggatctgatggagcctttaacttttgggacaaagatagcaaacagaggctt
aaggctatgctgaggtgcaatcagccaataccttgcagcactttcaacaacgatggttca
atatttgcatatgcggtatgttatgattggagcaagggtgctgaaaatcataatccatca
acagcaaagacctatatttacctacatctgccccaggaggctgaggtgaaaggcaaacca
cgggctggaacaagcagcagaaagtga
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