Sesamum indicum (sesame): 105169223
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Entry
105169223 CDS
T04135
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105169223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105169223
Spliceosome [BR:
sind03041
]
Common components
Common spliceosomal components
SR proteins
105169223
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
105169223
NCBI-ProteinID:
XP_020552059
UniProt:
A0A8M8V6U2
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All DBs
Position
LG8:complement(18103750..18108406)
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AA seq
235 aa
AA seq
DB search
MPRPTDIADTTYSLLVLNVNFRTTADDLFPLFEKYGKVIDVFIPRDRRTGESRGFAFVRF
MYKDEAQKAVDKLDGRVVDGREIAVQFAKYGPHAERIHDGRIVEKLPRRRGRSRSRSPRR
RSQDGYYEDRDYRRRYRSRSMHRDEHKRDYWHRSRSYSGSPEYDRGRGRRRYDDERRGRS
RSFDSASPNRNLSPRRASSPRIGSPGRHSHRRSITPGNLSPRNRVVDSQSPLHQN
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcccgacggacattgccgacaccacctattctcttctagttctcaacgtcaac
ttccgcacgacggcggacgatctgtttcctctgttcgagaagtatggaaaggtcatcgat
gtctttattcccagagatcggaggactggtgaatcacgtggttttgcttttgttcgtttc
atgtacaaagatgaagcgcagaaagctgtggataagctagatgggagagtggttgatgga
agagaaattgctgttcaatttgcaaagtacggtccacatgcagaacgaatccacgacgga
aggatagttgaaaagcttccacgacgccgaggtagatcaagaagtaggagccctcggaga
aggtctcaagatggttactatgaagatagagattacaggaggagataccggagcagaagt
atgcatagggatgagcataaacgagattattggcataggagcaggagttatagtggaagt
ccagagtatgatagaggtcgtggcaggagacgatatgatgatgagcgacgaggcaggagc
agatcatttgacagtgcctctccgaataggaatttgtcgcctagaagggcatcatctcct
agaattggaagtcctgggaggcacagtcataggcgctcaataactcctggaaatctgtcc
cctcgcaaccgggttgttgattctcaaagccctttacatcaaaactga
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