Sesamum indicum (sesame): 105169247
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Entry
105169247 CDS
T04135
Name
(RefSeq) DNA topoisomerase 2 isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sind03032
]
105169247
03036 Chromosome and associated proteins [BR:
sind03036
]
105169247
Enzymes [BR:
sind01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
105169247
DNA replication proteins [BR:
sind03032
]
Eukaryotic type
DNA Topoisomerases
105169247
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
105169247
Centrosome formation proteins
Centriole proteins
105169247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
HATPase_c
Toprim
Motif
Other DBs
NCBI-GeneID:
105169247
NCBI-ProteinID:
XP_011087914
UniProt:
A0A6I9U236
LinkDB
All DBs
Position
LG1:complement(15692356..15699182)
Genome browser
AA seq
1484 aa
AA seq
DB search
MAGAKKAPLTTSNNANIPPPETTIAGGGAGKKTIEQTYQKKTQLEHILLRPDTYIGSIEK
HTQTLWVYEDEQMVQKSITYVPGLYKIFDEILVNAADNKQRDPKMDSVKVTIDVESNSIS
VYNNGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNEKKTTGGRNGYGAKLTNIFSTEF
VIETADGKRQRKYKQVFSNNMGTKSEPIISKCKAGENWTKITFKPDLAKFSMSYLEEDVV
ALMKKRVIDVAGCLGKTVKVELNGRLFHFKSFSNYCDLYLKPASASSSDPLPRFEEEVHD
RWQICISRSEGQFQQVSFVNGIATVKGGTHVDYVTNKITSHLVTVIKNKNKKNKKFDLKP
HAVKNHLWVFVNALIDNPAFDSQTKETLTLRAASFGSSWDFSSKFLDKVAKSDIMKNIEE
WAEFKQKKDLKKTDGSKDRRIYGLTKLADANEAGGKNSEKCTLILTEGDSAKALAIAGLS
VVGRDHYGVFPLRGKLLNVREASHNQLMQNVEIQHIKQILGLQHGKQYDSVKSLRYGHLM
IMTDQDHDGSHIKGLLINFIHSFWPSLLKVPTFLLEFITPIVKASRKDGKKKESFYTMPQ
YEAWKEKLGADAKNWSIKYYKGLGTSTDQEGKEYFEDLGKHKKDFVWVDEQDGEAIELAF
SKKKIEARKNWIRQFEPGTYLSEQDKHIKYRDFVHKELILFSIADLQRSIPSMVDGLKPG
QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQDYVGSNNINLLL
PNGQFGTRGQGGKDHASARYIFTQLSPITRYLFPKADDILLNYLNEDGQSIEPSWYVPII
PMVLVNGSEGIGTGWSSFIPNYNPLDIIANLRHLLNDEPMVPMHPWYKGFRGSIEKTATK
EAGNSYTVSGIIEELDERTLSITELPVRKWTQDYKEFLESISAENEKSKDPFIEGCRDNS
GGEIVNFLVYLSAENLLIAKQEGLLKKFKLTTSISTSNMHLFDAKGVIKKYDTPEQILEE
FFHIRLEFYEKRKRVLLANLENDMLKCENKCRFIQCVVESSIIVSNRRRADLFLELKEKG
FTPFPKKKTAAEVAIAGSLDEAEETEENTSASDYDYLLSLAIGTLTAEKIQELRAERDKL
MQEVENLKRATVKSLWMNDLDALESKFIEEQNKSEKKWEKEREKINGTVNISRPVQKNPR
KNNKKATNKESQMEVSGDTVPEAGNAGDIKKPKGRTAAKKKAPAEKQVTSVADENDDEEI
SDLRHRLAAYNFDSSPDRPQEMETEEVSQLQTKKKEPSRKAAAQKKPLPTVSESHDDDDI
QIIDDDDDFVPDEKKKKGGRKPGNAKAAKPPSTKKRGPAASKQSQTLGQKLITEVLKPAE
NSPEKKVRKVRASPFNKKSGSILGRTINVEEEEEGSTSAEQADSTSTLGSVTDVGQAVAP
KARPQRANRGKATYVISDDSESDDPAEDFESDAAEDYSDFDDED
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atggccggagccaagaaagcccctttgaccaccagcaataatgccaatatcccaccacct
gaaactaccatcgccggcgggggcgccggcaaaaagactatagaacagacctaccagaag
aaaacccagctcgaacacatccttctccgccctgatacctacattggttccattgagaaa
cacacccaaaccctgtgggtgtacgaggacgaacaaatggttcaaaaatcaatcacctat
gtgccgggcctttacaagatcttcgacgagatcctcgtcaatgctgccgataacaaacag
agggaccccaagatggattccgtgaaagtgacgattgatgttgaatccaatagcattagc
gtgtacaacaacggggatggggtccctgttgagatccatcaggaggaaggggtttatgtg
ccggaattgatttttgggcatttgttgactagtagtaattatgatgacaatgagaagaag
acgacgggtgggaggaacgggtatggggcgaaactcacaaatatattctcgactgagttt
gtgattgagactgcggacgggaagaggcagagaaaatacaagcaggttttctctaataac
atgggcacaaaatctgagcctattatatcaaaatgcaaagctggggagaattggactaag
attacgttcaagccagatttggcaaaatttagcatgagttatttggaggaggacgttgtt
gccctgatgaagaagcgtgtaattgatgttgcgggatgccttgggaagactgtgaaggtg
gaattgaatggacggctgttccatttcaaatcattttccaactattgtgacctttatcta
aaacctgcatcagcttccagctcagatccactcccaagatttgaagaggaagtgcatgat
aggtggcagatttgtataagtcgtagtgaaggacaatttcaacaggtcagcttcgtaaat
ggaattgcaacagtcaagggtgggactcatgtcgattatgtaactaataagataacaagc
catcttgttactgtaataaagaacaagaacaagaagaacaagaagtttgaccttaaacct
catgctgtgaagaaccatctctgggtgtttgtcaatgccctcattgacaatcctgcattt
gattctcaaaccaaagagactctaacacttcgtgcagcgagttttggctcttcgtgggat
ttctcttcgaagttcctagacaaagttgccaagtcagatataatgaaaaacattgaggaa
tgggcagaatttaaacagaagaaagatcttaagaaaacagacggatcaaaagacaggagg
atttatggactaaccaaactagctgatgctaatgaggctggggggaagaattccgagaaa
tgtaccttgattttgacagaaggagattcagccaaggcacttgcaattgctggactttct
gtggttgggcgagatcactatggtgtgttccctctaagaggaaagttgctcaatgtgagg
gaagcaagccataatcagctaatgcagaatgttgaaatacagcatatcaagcagatttta
ggactccagcatggtaaacagtatgatagtgtcaagtcactcagatatggacacttgatg
ataatgactgatcaggatcatgatggttctcatatcaagggtctattaattaacttcatc
cattcattctggccatctttgctcaaagttcctaccttcctgttggagttcattactcct
atcgtaaaggccagtcgtaaagatgggaagaaaaaagaatccttctatactatgcctcag
tatgaagcatggaaagagaagttgggggcagatgcaaagaattggtctattaagtactat
aaggggttggggacgagcacagatcaggaagggaaggagtatttcgaagatcttggcaag
cacaagaaggattttgtttgggtggatgaacaagatggggaggcaatagaacttgctttc
agtaagaaaaagattgaagctagaaagaattggatccggcaatttgagcctggcacgtac
cttagtgagcaagataaacacatcaaatatcgtgactttgtccataaagaactcatattg
ttttcaatagcagatctccagagatcgattccatcaatggttgatgggctgaaacctggt
caaagaaagattcttttctgttctttcaaaaggaactttatcaaggaagcgaaagttgca
cagttctctggttatgtgtcagaacactcggcttaccatcatggagaacaaagtcttgct
agtaccataataggcatggctcaagattatgtgggtagcaacaatataaatcttctttta
ccaaatgggcagtttggtacacgaggccagggtgggaaagatcatgccagtgcaaggtat
attttcacgcagctgtctcctattacacgttatttgtttccaaaggcagatgacattctc
ctcaactacctaaatgaagatggacaatcgattgaaccttcttggtatgtcccaatcata
ccaatggttctagtaaatggaagtgaaggaataggcactggatggagttctttcatacct
aattataaccctctggatattattgccaatctgaggcatttgttgaacgatgaaccaatg
gttcctatgcatccatggtataaaggattcagaggttcaatcgagaaaactgccacaaaa
gaagctgggaatagctacacagtcagtggaatcatagaagaactggatgaaagaacatta
agtataacagaacttccagttcgaaagtggacccaagattataaggaatttttggagtcc
atttctgctgagaatgagaagagcaaggatccatttatagagggttgccgcgataacagt
ggtggagaaattgtgaatttcttggtttatttgtcagcggagaatcttttgatagctaag
caagagggtttgctgaagaaatttaagttaaccacttctataagcacaagtaacatgcat
ctatttgatgcgaaaggtgtgatcaagaaatacgacacccctgaacaaattcttgaggaa
ttcttccacataaggcttgagttttacgagaaaagaaagagagttttgttggccaacctt
gaaaacgatatgttaaaatgtgaaaataagtgtagatttattcagtgcgtggtggaaagt
agcatcattgtgagcaacaggagaagggctgatttattccttgagttaaaagaaaagggt
tttactcctttcccaaaaaagaaaaccgctgctgaagttgctattgctggttcacttgat
gaggcagaggaaactgaagagaacacttctgcaagtgattatgactacttgttgtctttg
gcgattggtaccttaactgctgaaaagatacaagaattacgtgctgagagggataagctc
atgcaagaagttgaaaacctgaaaagagcaaccgtaaagtctttgtggatgaatgacctt
gatgctcttgagagcaaattcatcgaggaacaaaacaaaagtgagaaaaaatgggagaag
gaaagagaaaagataaacggcactgtaaacatatcaagaccagtgcaaaagaatccacgt
aagaacaacaagaaggcaaccaacaaagagtcgcaaatggaagtgtcaggtgatactgta
cctgaagcaggtaatgctggtgacatcaagaaaccaaaaggcaggacagctgctaaaaag
aaagctccagcagaaaagcaggttacatcagttgctgatgaaaatgatgatgaggaaata
tctgatctgagacatcgacttgcagcttacaattttgactcttctcctgatcggccacaa
gaaatggaaacagaagaggtgtcgcagttgcaaacaaagaagaaagaaccaagtagaaag
gctgctgcacagaagaagccattgccaactgtttcagagtctcatgatgatgatgatatc
cagatcattgatgatgacgatgactttgtgcctgacgagaagaaaaagaaaggaggcaga
aaaccaggaaatgccaaagcagccaaacctccttcaacaaagaaaagagggccggctgct
agcaagcagtctcagactctaggccagaaactgatcacagaagtgctcaagcccgcagaa
aattcgcctgaaaagaaagtgaggaaagtgagagcatctccatttaacaagaaaagcggt
tccattctgggaaggacgatcaatgtcgaagaggaagaagagggctccacttcagcagaa
caagcagactcaacttctaccttgggtagcgtgacagacgtaggccaagcagtggctccg
aaagctagacctcagagagctaaccgaggcaaagcaacatatgtcataagtgatgattct
gagagtgatgatccagctgaagattttgagagtgatgcagctgaagattactctgacttt
gatgatgaggactaa
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integrated database retrieval system
