Sesamum indicum (sesame): 105169752
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Entry
105169752 CDS
T04135
Name
(RefSeq) uncharacterized protein LOC105169752
KO
K14311
nuclear pore complex protein Nup188
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105169752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105169752
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105169752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N
Nup188_N-subdom_III
Motif
Other DBs
NCBI-GeneID:
105169752
NCBI-ProteinID:
XP_011088558
UniProt:
A0A6I9TUE6
LinkDB
All DBs
Position
LG8:20828116..20846480
Genome browser
AA seq
1983 aa
AA seq
DB search
MATPATTNATDQSSNSTKIVDASLWWEPFNAFLTELESASGSSDLPQSLEKKLKDNHAWF
LDTILQFKSPNQRSREALDSPRVKIGPHELNVQPELKDAALKISSIMCLDEVQSYILVKR
SVERNDAAASDIHPDILNLVVLEYYIERQCLLKCTRQILMHALYYGSQSEEGSAVLEEAQ
RLISDGLECKLLSIFQDLLSSNYPEQMDIDLYTLWAEETLIEDNLILDILFLVYYESYCT
CDAKCWKRLCTLYQGIVNGTYNFQKLAISTEAIRSIYHAKVQLLFILIEALNLENLLQMI
HDNTPFRQGTIAFSDVDVQQIDALVSSFNIFEAKEAGPLILAWAVFLCLISSLPGKEENN
LLMEIDHIGYVRQAFQASSLGYFLEILQSDTLKDSDGPVAGYRSVLRTFISAFIASYEIS
LQFGDDNLKLILEILCKIYRGEESLCIQFWDRDSFIDGPVRCLLCNLEGEFPFRTIELVS
LLSALCEGAWPSECVFNFLDKSVGLSTPLEISSDSAVDAVVPEIIETRYPLKVAGIEGLI
IPSKSRGQVMRMIDKKYALVRWEYTESGVLVLLLRLAQQQYAQNTEELIVILDLLSRLVT
FNVAVCYSLMDAWNSFHDEETGIGIQEKYVRIDVVEIICALVKNLLPSANGAVMMSMGVT
ILTKMLRCLPSHVATMVLKGNIFDVAYRTNPFDTVPNSLSSGSWLLSGRLAKMLLIDCEQ
SDCSLTLSVLDFTMNLLETGLETDTILALIVFSLRYVLVNHEFWKYKVKYARWKVTLKVL
EVMKKCIWSISSCHKLGEVVRDIMLSDSSIHSALFRIVCTTTPSLEKLYVSRLFDMLDIE
GLHQALSSGLDVLISMVYAFSKDSPSLPVFHQAVLSPMTKPIPVISAAISLMSYFRDPKI
QIGAARLLSVLFISDISQSYTYSNATLCLDDKQLANFRKSICNTLREQSPWNEDLILATL
KLLTSVARNQPAFLTAIIMSEEYLNAQVHNVDSKHQPHKTEHGSLDSKEETLLHAILQYI
RRSEGLFDSQMNILLCFLSFLRALWQGAPHFTKILEQLKVSDKFWRHLTDSVRLISQIDL
SGKLTEKQLQNVAYKYRYLSNVLDILGYEIFLQKKLMHAEADLKRVSKSPTNGTEEADNS
PFAKDGGVGSLKEIISTWGKSSILSDLIKACVSWEYGNSSHLRAKVAFGLFSVHAMVKLR
NGDLGSLSLSLIERIITLSQKLLKLPAFSELLTRYKERGYSGGQELENLILSDLFYHIQG
ELEGRQIDNRPFKELLQFLLDSRFLDAYIHIKQDHFADINSIYLYDTVRLRADLGLEMWE
LSAWRESKEVAETMLLCLEEANSRMLLSHSKLSALRGLITLLYMHEDNVSENEASIGLKI
SENVVSSCIDHICLCLHATLESLTPIPNSNEDVFDILTAQAELLLLLVRSKSNSIPTPAC
VLILKTSGYGLKVLRSCRPSVAIGTATRFLLMLILSSVELIHKDLHSGTRIASVEGSAEV
SNSSLGLLPVLCDCIEHADHCALSLSAINLILKGFSTPATWFPIIWEHLRLQHIIQNLQD
VTLSKTVSVILKFLLNLARVRQGAEMLLNAGILASLKMLLSDLPDGGHFSVIQSERIFSS
TSDKTEKSEPIWGLSLAVLTAIIQSLGDSSAARVVDYVMACILVEKAPVISYYLSAPDFP
TDGHETKRARALKSNISLSELKETQNTLALICVLARYWNSWKKVMQNMESQLREKSIHLL
AFISRATQRPGESPKRDAPLLCHPLLKDEFEWYKKQPFINSRNGWFALAALGCKLNPKFA
SLSSRTTALVLRDQSNDNADTSPETHLSDLIAIEIYKIAFLLLKFLCMQAESAARKAEEV
GFVDVAHFPELPMPDILHGMQDQGIAIITELCEANKMKQLAPEIQEACLLLLQITVMALY
LEFCVIQICGIRPVLGHVETFSKEFRLLIRATKDHLFLKEPLRNLKQIVSFVYPELIQAE
GLF
NT seq
5952 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaccagcaactacaaacgccaccgatcaatcttccaactctacaaaaatagtc
gacgcttccctctggtgggaaccttttaatgcctttcttaccgaacttgagagcgcctcc
ggctcctccgacctcccccagtctctggagaagaagttgaaagataatcacgcttggttt
ctggacaccatcttgcaattcaagtcgccaaatcagagatcaagggaagcactggattca
cccagagtcaagataggtccacacgagttgaatgtacagcctgaattgaaagatgcagcg
ctcaagattagttccatcatgtgtttagatgaggtgcagtcttatatccttgtaaaaaga
tcagtggaacgaaatgatgcagcagctagtgatatacatccggatattctaaatttggtt
gtgcttgagtactacattgaaaggcaatgcttgttgaagtgcacaagacagatccttatg
catgccttgtactatggctcccaatcagaagaaggttctgctgtattagaggaggcacaa
aggctaatttctgatggacttgaatgtaaattactttccatcttccaggaccttctgtct
tccaactaccccgagcagatggatattgacctctacactttgtgggctgaggagacactt
atagaggacaatttaattctcgacattcttttccttgtttattatgagtcctactgtact
tgtgacgccaaatgctggaagagattgtgtacgctataccagggtattgtcaatgggacg
tacaacttccagaaactggcaatatcaactgaagccattcgttctatttatcatgccaaa
gttcagctgctattcattctcattgaggctttaaacctggaaaatctcctccaaatgatc
catgacaatactcctttcaggcagggcacaatagccttttcagatgtggatgttcagcaa
atagatgccttggtttctagtttcaatattttcgaggccaaagaagcaggtcctctgatc
ctggcatgggcagtatttctttgtctaatttcttcccttccagggaaagaggaaaataat
ttgctaatggagatagatcacattggttatgttcgtcaagcattccaggcttcatctttg
ggatatttcctcgaaattctgcaaagcgacacactgaaagattcagatggtccagtagca
ggttatcggagtgttttaaggacgtttatatcagcatttattgcatcttatgagatcagt
ctccagtttggggatgataatctgaaattaatattggagatactatgcaaaatctacaga
ggggaggagtccctttgtattcagttctgggacagggacagtttcattgatggtcctgtc
aggtgccttctttgcaacttagagggtgaatttccattccggactattgaacttgtcagc
ttgttgtcggccctttgtgaaggtgcatggccatcagaatgtgtatttaatttccttgat
aagtctgttgggctatcaactcctcttgagataagcagtgattctgctgtagatgctgtt
gttcccgagatcattgaaacacgttatcccttgaaagttgctggtattgaaggcttgata
attcctagcaagtctcggggtcaagtgatgagaatgattgacaaaaagtacgctctggtg
cggtgggagtacactgaatctggagtacttgtgctacttttgcgcttagctcaacagcag
tatgcacaaaacacggaggagctcattgtaatacttgatttgctcagccgattggtgact
ttcaatgtggctgtttgttattctcttatggatgcttggaattcattccatgatgaagaa
actggcatagggatccaggaaaaatatgtgcgcatcgatgtggttgagattatctgtgct
ttggtgaaaaatctccttcccagtgcgaatggtgcagtaatgatgtctatgggggttact
atattgacgaaaatgttgagatgcttgccatctcatgtagctacaatggtcttgaagggc
aatatatttgatgttgcctataggacgaacccttttgataccgtccccaacagtttatca
agtgggtcctggttgctttctggaagacttgccaaaatgcttttgattgactgtgagcag
agtgattgctcgcttactctttcagtgctcgacttcactatgaatctcctggagactgga
ttagaaactgataccatccttgcactcattgttttctcccttcgctatgttcttgttaat
catgaattctggaaatataaggtgaagtatgctcggtggaaggtgacactgaaggtgctt
gaagttatgaagaaatgtatttggtcgatctcaagctgtcacaaactgggggaagtagtt
cgtgatataatgctttcagattcttccatccactctgccctttttcgaattgtttgtaca
actacaccgagcttagagaaactttatgtgtctcgccttttcgacatgctggacattgag
gggctgcatcaagccttatcctctgggttggatgtccttatcagtatggtatatgctttt
tcaaaggattcgccaagtcttccagttttccatcaagcagttctatcaccaatgacaaag
ccaattcctgtgatcagtgctgccatatcattgatgtcatacttccgagatcctaagata
caaattggtgcagcaaggttgctgtctgtgttatttatatccgatatttcacaatcctat
acttacagcaatgcgactctctgtttggatgataagcagcttgccaattttcggaaatcc
atttgcaacactctccgcgagcagtcaccttggaatgaggatcttattcttgctactttg
aagctcctgacgtcagttgcacgtaatcagcctgcttttctaactgctatcatcatgtct
gaagagtatttgaatgctcaagtgcataatgtggactccaagcaccagccacataaaact
gagcatggatcattggattccaaggaagaaactcttttgcatgcaattctgcagtatatc
agaaggtctgaaggtttatttgatagccaaatgaatatattattatgtttcttgagcttt
ctgagggcactgtggcaaggtgcgccccatttcacaaaaattttggagcagctaaaagtt
tcagataagttctggagacatttgaccgattctgtcaggctcatcagtcaaatcgattta
tctgggaagttaactgaaaagcagcttcagaacgtagcttacaaatatcgatacctatca
aatgttttggatatacttggttatgagattttcctgcaaaagaaattgatgcatgccgag
gcagatttgaagcgagtctcgaaatcaccaactaatgggacagaagaagcagataattct
ccgtttgcaaaagatggaggtgttggtagcctaaaggagataatttcaacctggggtaag
agttcaatattgagtgacctcataaaggcatgtgtttcttgggaatatggtaacagcagt
catctccgtgcgaaggttgcttttggtttattttccgtgcatgcgatggtgaaattaaga
aatggcgacctgggtagtttgtcattgtcactaattgaaaggattattacattatcgcaa
aagttgttgaagttgccggctttctcagaattgttgactaggtacaaagagcgtggttac
agtggaggacaagagctggagaatttgatactaagcgatctgttttaccacatacaagga
gagcttgaaggtcgtcagattgataacagaccgtttaaagagttattgcagtttttgcta
gattcaagattcttggacgcttatatacatataaaacaagatcattttgccgacatcaat
agtatctacctgtatgatactgttcgcctccgggcagacttggggttagaaatgtgggag
ctgtcagcgtggagagaatctaaagaagttgcagaaactatgctcctttgcttggaagaa
gcaaattcaagaatgttgctctctcattcgaagctttcagctttgagagggctaattacc
ttattgtatatgcacgaagacaatgtatcagagaatgaagcttcaattgggctgaagatt
tctgaaaacgtagtttcatcatgcatcgaccacatatgtctgtgtctccatgctacatta
gaatctttgactcctattcctaattctaatgaagatgtgtttgatatcctcacggctcaa
gcggagctactgctactccttgttagatctaaaagtaattctattcctacacctgcatgt
gttcttatcttaaagacctcaggatatggtctcaaagtattacgcagctgtaggccatct
gttgccattggaacagccacgaggtttttgcttatgttgatcctcagttcagttgagttg
attcacaaggatttgcattcgggcactagaattgcatccgttgaaggttctgctgaggta
tctaattcaagtttggggttattgcctgttctatgcgactgcattgagcatgcagatcat
tgtgccctgtctttgtctgctatcaatttgatactgaaaggtttctcaacccctgccact
tggttccccattatatgggaacatctgcggttgcagcatattattcagaatttgcaagat
gtaactttgtccaaaactgtttcagtaatattgaaatttcttttgaaccttgcacgtgtg
agacaaggcgctgagatgcttttaaatgctgggatccttgcgtcgctaaaaatgttattg
tctgacttacctgacggcgggcatttttctgtgatccaaagtgagagaattttctccagc
acatccgacaaaacagaaaagtctgaacccatttggggcctcagcttggctgtacttaca
gcaattattcagtcattgggcgatagttctgctgctcgtgttgtggattatgtgatggct
tgcatattggttgagaaagcccctgtaatttcgtattatctcagtgcaccagattttcca
actgacgggcatgaaactaaaagagctcgtgcactgaaatcaaatatttctttaagcgag
cttaaggaaacacagaatactttggccctaatatgtgtcttagcaagatattggaattca
tggaagaaagtaatgcaaaatatggagtcccagttaagggaaaaaagtatccatttgctg
gccttcataagccgtgcaactcagcgccctggagaatcacctaagagagatgctcctcta
ttgtgccatcctctactcaaagacgaatttgagtggtacaagaaacaaccatttattaac
agcagaaatggctggtttgctctggctgcccttggctgcaagttaaatcccaagtttgcg
tccttgtcttcgagaacaacagctcttgttttgagagatcagtcaaacgacaatgctgat
acatctccggagacacatttgtcggacttgattgcaattgagatatacaaaattgccttt
cttctcttgaagtttttatgtatgcaagctgaaagtgctgccagaaaggcagaggaggtt
ggttttgtagatgttgcacattttcctgagctaccaatgcctgatatcttacatggcatg
caggatcaaggaattgcaatcatcactgaactgtgtgaagccaacaagatgaaacagctt
gctcctgaaatacaggaggcgtgcctcttgctgttacaaataacagtcatggcattgtac
ttagagttttgtgtcatacaaatttgtgggatacggcctgtattgggccatgtcgagaca
ttctccaaggaatttcggctgcttattagagcaaccaaggaccatctctttctaaaagag
ccactgagaaacttgaagcaaattgtatcctttgtgtatcctgagttgatacaggcagaa
ggcttgttttga
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