KEGG   Sesamum indicum (sesame): 105169792
Entry
105169792         CDS       T04135                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD-40 repeat-containing protein MSI3
  KO
K10752  histone-binding protein RBBP4
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03082  ATP-dependent chromatin remodeling
sind03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105169792
   03083 Polycomb repressive complex
    105169792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sind03036]
    105169792
Chromosome and associated proteins [BR:sind03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     105169792
  Histone modification proteins
   HAT complexes
    HATB complex
     105169792
   HDAC complexes
    Sin3A-HDAC complex
     105169792
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     105169792
    PRC2.2
     105169792
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     105169792
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    105169792
  Chromatin remodeling factors
   NuRD complex
    105169792
   NuRF complex
    105169792
   NuRF complex (fruit fly)
    105169792
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_WDHD1_1st EIF3I WD_LRWD1 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_HPS5 ANAPC4_WD40 WD40_RFWD3 MIOS_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_DCAF4 DUF6922 WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 105169792
NCBI-ProteinID: XP_011088610
UniProt: A0A6I9TXM0
LinkDB
Position
LG8:complement(21023714..21026753)
AA seq 393 aa
MEEVVEEEFSVWKKNTPLLYDLVICHSLEWPSLTVQFAXPSSDGGDLAVHKLILGTHTSD
GIPNFLMLADAYLPRDPSSALAVDPENSIIPKVEIVQKIQVDGEVNRARCMLQNQAIIAA
KTNGSQVYVFDCTKQLEAKGASCDPDLRLKGHDKEGYGLSWSSLKEGYLLSGSNDCKICF
WDISSMPQEKVLEANYIYKGHENVVEDVSWHLKNENLFGSVGDDCKLMIWDLRTNKCQHS
VVVHEKEVNYLSFNPFNEWALATASSDTTVGLFDMRNLSSPLHALGNHMEEVFQVEWNPN
HETILASSADDRRLMVWDLNRVGDEQLEGEAEDGPPELLFSHGGHKAKISDFSWNKNEPW
VISSVAEDNTVQVWQMSESIYRDEDDIQAADFS
NT seq 1182 nt   +upstreamnt  +downstreamnt
atggaagaggtggtggaggaggagttttcagtgtggaagaagaatacaccgttgctgtac
gatctcgtcatctgccactccctcgagtggccgtctctcaccgtacagtttgccnngcct
tcgtccgacggtggtgatctcgccgtccacaaattgatcctggggacccatacatccgat
ggtatccccaattttctcatgctcgcggacgcgtacctcccccgcgacccctcctctgcc
ctcgcagtcgaccccgagaactccatcatccccaaggtagagatagttcaaaagatacaa
gttgatggagaagtgaatagggcaagatgtatgttgcaaaatcaagctataattgctgcg
aagaccaatggttcccaagtatatgtatttgactgtactaagcagctggaggccaaaggc
gcttcctgtgatccggacttgagactgaaaggacatgacaaggaaggatatggcttgtcg
tggagctcactgaaggaaggttatcttttgagtggttcaaacgattgtaaaatatgtttt
tgggatatctcttcaatgcctcaagagaaagtgcttgaagcaaactatatttataagggt
catgaaaatgtggttgaggatgtgtcatggcatctaaagaatgaaaatttgtttggctcc
gtgggagatgattgcaagctaatgatttgggatttacgcacaaacaagtgccaacactca
gttgttgtgcatgaaaaggaggtgaactatttatccttcaatccatttaacgagtgggct
ttggcgactgcatcctctgataccacagtgggtctgtttgatatgcggaacttgagttct
ccactgcatgctcttggcaatcatatggaagaggttttccaggtagaatggaatcctaac
catgaaactattttggcatcttctgctgatgacagaaggttgatggtttgggaccttaac
agggttggggatgagcagttggaaggggaagctgaagatggcccccctgagctcctcttc
tcacatggtggtcataaagcaaagatttcagacttttcgtggaacaagaatgagccatgg
gtcatttcaagtgtagcagaggataatacagtgcaagtctggcaaatgtctgagagcatc
taccgggatgaggatgacatccaagccgctgatttttcttag

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