Sesamum indicum (sesame): 105169803
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Entry
105169803 CDS
T04135
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105169803
Spliceosome [BR:
sind03041
]
Common components
Common spliceosomal components
General mRNP proteins
105169803
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
105169803
NCBI-ProteinID:
XP_011088625
UniProt:
A0A6I9TXN7
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Position
LG8:complement(21084750..21092115)
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AA seq
604 aa
AA seq
DB search
MDFDEYEYLENTVENPELKKLEDKANEVIEHEEKDRSRSSKHRGDDDADDLERLSKRSRS
RKESHDHDKDRSSRYGSSSRDREKGERDRHISSRELRDRDKEHGTGKERNRDRDRDREKE
RDSDKKGVGSRERRERESERERNKEEERERSKRSRSYSERNHDDQGREKTRDMEIIDSDY
KERRRERKFGDRAHESRRYKEKKEDVVEPEADPERDQRTVFAYQITLKAGERDVYEFFSR
AGKVRDVKLIMDRNTRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV
QSTSGGGGLTGPYSGGARRLYVGNLPVAIKEDQLRQVFESFGTVELVQMPSEPGTGNCKG
YAFIQFARLEDAKAAQNLNGQLEIAGRVIKVSAVTDQVGMQDAGANIADFDDDDGTGLSL
NAHSRALLMQKLDRTGTASRFNTFLFAAFLDFHANISLTSVFTFCSFTDSSAAVLGQISV
PVLPGLADAALSIPALTGPPMDTIGAPSECLLLKNMFDPNSEAEPDFDLDIKDDVQEECS
KFGRLKHIYVEKNSAGFVYLRFENAESAIAAQRALHGRWFAGKMITATFMLHHNYEAKFP
DSSG
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgagtatgaatatctggagaatacagtggaaaatccggaacttaagaag
ttggaagataaggcaaatgaggtaattgagcatgaagagaaagataggagtcggagttca
aagcacagaggtgatgatgatgctgatgacttggaacggctgtcaaagcggtcgaggtca
aggaaagagtctcatgaccatgacaaagataggagctctcgctatggctcatcttctaga
gatagggagaaaggggagagagacagacatattagtagtcgggagcttcgagacagggac
aaggagcacggaactggaaaggagagaaatagggacagggatagagatagggaaaaagag
agggatagtgacaagaaaggggttggtagcagagagaggagagaacgtgaatctgaaagg
gagagaaacaaggaagaggaacgagagaggtcaaagcgaagcaggagctactcagaaagg
aatcatgatgaccagggaagagaaaaaactagggacatggaaatcattgatagtgattat
aaagaaaggcgaagagaaaggaaattcggagatcgagcccatgaaagcagaagatacaaa
gagaaaaaagaagatgtggtggagccagaagctgatcctgaacgagatcagagaacagtt
tttgcttatcagattaccttaaaggcaggtgaacgagatgtatacgagttcttctccaga
gctggcaaggtcagagatgtaaagcttataatggatcgcaataccagacgctccaaaggg
gttggatatattgaattttatgatgtaatgtcagttcctatggcaatagctctctctggt
cagcctcttcttggtcagcctgtcatggttaagccatcagaagctgaaaagaatctcgtt
cagtctacatctggaggaggtgggcttactggcccatactcagggggagcgagaaggctg
tatgttggtaatctgccagttgctatcaaagaagatcagcttcgccaggtttttgaatct
tttggaacagttgagctggtccagatgccgagtgaaccgggaactgggaattgcaaaggt
tatgcttttatacagtttgcacgtcttgaagatgcaaaggctgctcagaatttaaatggg
caactggagatcgcaggtcgtgtgatcaaggtgtctgctgtcacagatcaggtaggaatg
caagatgcaggggcaaatattgctgattttgatgatgatgacggcactggcttgtcattg
aatgcacactctcgagcacttcttatgcagaaattggatcgcactggcactgcttcaagg
ttcaatacctttctgtttgcagcctttctggattttcatgctaatatttctcttacatca
gttttcaccttttgcagcttcactgattcatcagcagcagttcttggacaaatttccgtt
ccagtgttacctgggttggcggatgcagctctgtctatacctgcacttactggtcctccc
atggatactattggtgctcccagtgaatgtttattgctgaaaaacatgtttgatccaaac
tcagaggccgaaccagattttgatcttgatatcaaggacgatgtccaggaagaatgttca
aaatttggtagattaaagcatatctatgttgagaagaactctgctggttttgtatacctg
cgttttgaaaatgctgaatccgcaattgccgcacaacgtgcacttcatggtaggtggttt
gctggaaagatgattactgcaacattcatgcttcaccataattatgaggctaaatttcct
gatagcagcggctag
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