Sesamum indicum (sesame): 105169958
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Entry
105169958 CDS
T04135
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sind04131
]
105169958
Membrane trafficking [BR:
sind04131
]
Protein recycling
Others
EARP complex
105169958
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
Motif
Other DBs
NCBI-GeneID:
105169958
NCBI-ProteinID:
XP_011088811
UniProt:
A0A6I9TV47
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Position
LG9:complement(217275..235498)
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AA seq
1097 aa
AA seq
DB search
MQPGNNPLTLPFPLSPLLLLNAAGGGVGDLGEGGFELSRYLFLGSLLFYREGGGMDLSKV
GEKILSSVRSARSLGLLPSTSDRPEVPARAAAAAAVARVLAALPSDQRHNLSSSSEELSS
IYGSRSQGPAVDELEKEFYEEDFDPVRYILQQIPSEEKEPAYFEEKAALRLAQLDRISER
LSRHVMEHHEEMVEGMNLVKELEKDLKIANVICKNGQRHLTSSRNEVSRDLVVTESSKKK
QALLEMLPILTELRHAVDMQAVLDTCVEEGNFSKAFQVLSEYLQVLDSLSELSAVQEMSR
GVEVWLGKTLQKLDSLLLEVCQDFKEDAYLTVVDAYALIGDVSALAEKIQSFFMQEVLSE
SHSALRTILQEDAEHPNLQTARLTYSDLCIQIPESKFRQCLLATLAVLFKLMCSYYAITS
FRLEDKVLPCHNSSGRQQGNSAGVSEDPEREVTSTSLVEDGSVSASTDERRDDGTGASSS
GSTWFSLRKDAATFVSHTLQRGRRNLWHLTTSRVAVLLSSSAVSSTSIHQFLRNYEDLSI
FILAGEAFCGIEATEFRQKLKSICEGYFAAFHRQNIYALKMVMEKENWQIMPPETIQVVS
FPGLVGDGAALIVSSNSSRARLLHDNKSVGPLVSGSKRGGFSYWLENGNPFQLKLNGSSE
EYPDSFHPNGLATQVAGNTDKRTQHTKSSLNSGDVNHVNGTTLSEDENEDLHADFIDEDS
QLPSRISRPSHARHHSSHGNNEDMTAQTGSSLSLLRLLDKYARLMQKLEIVNVEFFKGFC
QLFEIFFHLVFESFCEHNTQPSGKGLNDSLPHKLKTALSRISQDCDQWIKPHSTSISSFS
PTSSGASYTHMDVTPTSPPSHLNHTTFGLKERCAGADTITLVAQLLHRSKAHLQSMLLQN
NGAVVEDFYVHLVDAVPELTQHIYRTTAKLLLHINGYVDRIANAKWEVKELGMEHNGYVD
LLLGEFKHYKTRLAHGGIRQEVQDLLLEYGLENVAETLIEGLSRVKKCTDEGRALMSLDL
QVLINGLKHFVSIDVRPKLQIVETYIKAYYLPETEFVHWSRAHPEYSKSQIVGLINLVAS
MKGWKRKTRLEVLEKIE
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgggtaataatccactgacactgccatttccacttagtccgttactgctattg
aatgccgctggaggcggcgttggtgatttgggagagggagggttcgaattgtcgaggtat
ttgttcctaggatcgctcctcttctatcgagaaggaggcggcatggacctgtccaaggtc
ggtgagaagattctcagctccgttcgctctgcgcgctcccttggtctcctgccttctaca
tccgatcgtcctgaggttccagcacgagctgctgcggcagcagctgtagcccgtgttctt
gctgcactaccttcagatcagaggcataatctctcttccagctctgaagaattaagttca
atatacgggagcagatctcaaggtccagctgttgatgaactcgagaaagaattctatgag
gaggattttgatcctgttagatatattttacaacaaattccctctgaagaaaaagagcca
gcatattttgaggaaaaggccgctcttcgactagcacaactggatagaatttctgagcgc
ttgtcacgccatgtgatggaacatcatgaagaaatggtggaggggatgaatctggtaaaa
gagttagagaaggacttgaagattgcaaatgttatttgcaagaatgggcaaaggcacctg
acatcttcaaggaatgaggtgtctagggatcttgttgttacagaaagttcaaaaaagaaa
caagccctcctggagatgctccccatcctaactgagcttcgtcatgcagtggacatgcaa
gcggttcttgatacttgtgttgaggaagggaatttctctaaggctttccaagtactatcc
gagtatttgcaagttctagatagtttgtcagaactttctgcagtgcaagagatgagccgt
ggtgttgaggtttggttgggaaaaactttgcaaaagttggattcacttctattagaagta
tgccaggacttcaaagaggatgcctatctcactgtggtcgatgcgtatgcactaattggt
gatgtttctgctctagctgaaaagatacaaagcttctttatgcaggaggttctctctgaa
agtcactctgcattgaggactattttgcaagaggatgctgaacaccccaatttgcaaact
gctaggcttacctacagtgatttgtgcattcagatacctgaatccaagttcaggcagtgt
ttactagcaacattagccgttctctttaagctgatgtgttcatattatgcaataacgagc
ttccgactagaagataaagtgttaccctgccataattccagtgggagacaacagggtaac
tcagctggggtctctgaggatcctgagagggaagtaacttctacttcgctggtagaagat
gggtccgtctctgcatcaactgatgagagaagagatgatggaactggagcatcaagtagt
ggatccacttggttctcattgcgtaaagatgcagcgacatttgtttcacataccttacaa
aggggtcgtaggaacctctggcaccttacaacaagccgtgtggcagtgttgctttcttct
tctgcagtttcttcaacaagcattcatcaatttttgagaaattatgaagatctgagtatc
ttcattctggctggggaagctttttgtgggatagaagctactgaatttcgccagaaactt
aaatctatttgtgaaggttattttgctgctttccatcgtcagaatatttatgccctaaaa
atggtcatggagaaggagaattggcagataatgcctccagaaacaattcaagtcgttagt
tttccagggctggttggtgatggagcagctctcattgtttcatccaatagttctagggca
agattactgcatgacaataaatcagttggtccacttgttagtgggtcaaagaggggtgga
ttttcatattggctggaaaatggaaacccatttcaattgaaattgaatggcagttctgag
gagtatcctgactcctttcatcccaatggcttggccacacaagtagctggaaatactgat
aagagaacccagcacactaaatcttccctaaacagtggtgatgtaaaccatgttaatggc
actactctttcagaagatgaaaatgaagatctccatgcagattttattgacgaagatagt
cagcttcctagtcgtatttccagaccaagtcatgcaaggcatcactcttcacatgggaat
aatgaagatatgacagcacagacaggatcttcgcttagtctcctgagattgctggacaaa
tatgcacgactgatgcagaaattagagattgtcaatgttgagtttttcaagggattttgc
cagttgtttgagatctttttccacttggtatttgaatcattctgtgaacataatactcaa
cctagtggaaagggcttgaatgactcacttcctcacaagctgaagactgcattatcaaga
atttcacaagactgtgaccagtggataaaacctcactctacatcaatttcttctttttcc
ccaacatcttcgggtgcatcatatacgcatatggatgtcacacctaccagtccgcctagt
cacttgaatcacacaacttttggactgaaggaaagatgtgctggtgctgatactataact
cttgttgctcaattattgcatagatctaaagcccatcttcaatcaatgcttctgcagaac
aatggagcagtagttgaggacttctatgtgcatttggtggatgctgttccggaacttact
cagcacatttatagaacaacagcgaaactattactccacattaatgggtacgttgaccgc
attgccaatgctaaatgggaggtgaaagagcttggaatggagcataacgggtatgttgat
ttattactgggagaatttaagcactacaaaacaaggcttgctcatgggggtatacggcaa
gaggttcaagacctcctcttagaatatggccttgaaaatgttgctgaaactctcatcgag
ggcctatctagggtgaagaagtgtactgatgaagggcgggcgctgatgtccctggatctt
caggttttaataaacggcctaaagcattttgtctcaattgatgtaagaccgaaattgcag
atagtggaaacttatatcaaggcctactatcttccagaaacagaattcgtccactggtca
cgtgcccatccggaatatagtaaaagtcaaatagtcgggcttatcaacctcgttgcttca
atgaaaggctggaaaaggaaaacgaggttggaagtgttagaaaagatagaatga
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